DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and zcchc17

DIOPT Version :10

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_956838.2 Gene:zcchc17 / 393516 ZFINID:ZDB-GENE-040325-2 Length:235 Species:Danio rerio


Alignment Length:204 Identity:45/204 - (22%)
Similarity:65/204 - (31%) Gaps:67/204 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 HQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMY----GSMSSTDQLSVFFTPPK 316
            |.:||.|            |:.|.                 |||    |.:.|......|...| 
Zfish     5 HMREPVG------------LDGLP-----------------PMYSILKGEVVSVTAYGAFVKIP- 39

  Fly   317 GTRKVVLATNIAETSITIPGIVYVIDCG---YVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAG 378
            |.||..|......::..:.....::|.|   ::||   ..|...|..|.:..|..|..|..||  
Zfish    40 GYRKQGLVHKSEMSACRVENPAEIVDVGEQVWIKV---IGKEMKDDKVKLSFSMKSVNQGTGR-- 99

  Fly   379 RMRPGKVYRLYTKSDYEALAPRQPPEMRRSEL---SGAILQLKAL--------GI-GNILRFDFP 431
            .:.|..|.             .:..|.||.:.   ||..:.|:|:        |. |:..:..|.
Zfish   100 DLDPNNVI-------------AEQDERRRRQFRDHSGQRITLEAVLNTTCKKCGCRGHFAKDCFS 151

  Fly   432 SPPPAQNLL 440
            ||....:||
Zfish   152 SPGLQYSLL 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 38..>669 CDD:441249 45/204 (22%)
zcchc17NP_956838.2 S1_pNO40 16..89 CDD:240191 18/93 (19%)

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