DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and Dhx30

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_006243888.1 Gene:Dhx30 / 367172 RGDID:1308888 Length:1222 Species:Rattus norvegicus


Alignment Length:685 Identity:205/685 - (29%)
Similarity:318/685 - (46%) Gaps:96/685 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGL-----IGITE 99
            :.::..:||:..:||.||..:|:|.||::.|:||.||:|::||.|.| .:.|:|.     :.||:
  Rat   455 IWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVIITQ 518

  Fly   100 PRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCT--KIKFMTEGILLREVLADPLLTQYG 162
            |||:|.|::|.||:.|.|..:...||:.|| |||.....  .:.|.|.|||||::.::|.|....
  Rat   519 PRRISAVSVAQRVSHELGPSLRRNVGFQVR-LESKPPARGGALLFCTVGILLRKLQSNPSLEGVS 582

  Fly   163 VIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEG 227
            .:||||.|||::.||.:|.|||.:.|...:|:|::.|||.|...||.:|     |...| :.:.|
  Rat   583 HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF-----GGCPV-IKVPG 641

  Fly   228 RMHPVSNFYL---------------------NEPCADYVKETVETVWKLHQKEPPGDILAFLTGQ 271
            .|:||...||                     .:.||..:....:.|..:..:..||.||.||.|.
  Rat   642 FMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGW 706

  Fly   272 EEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPG 336
            :|:......|:|.:...|.:.| :||::.::...||.::|..||.|.||:||||||||||||:..
  Rat   707 QEIKGVQQRLQEALGMHESKYL-ILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVND 770

  Fly   337 IVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQ 401
            ||:|:|.|..|.:.|:.||....|..|.||:|:.|||.|||||.:.|..|.|:.:|..|.:.|.|
  Rat   771 IVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQ 835

  Fly   402 PPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYL- 465
            .||:.|:.|...:||.|         ...|.....:.|..|::|. .:.|:||...|.:.:|.| 
  Rat   836 VPEILRTPLENLVLQAK---------IHMPEKTAVEFLSKAVDSP-NIKAVDEAVILLQEIGVLD 890

  Fly   466 -----------LAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIA 519
                       ||.:.....|:|.:.::....|...::.:::.|.     ..|.|:..|....:.
  Rat   891 QREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-----RDPFSSSLQNRAEVD 950

  Fly   520 HRKFEVAE---GDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLR-------------- 567
            ..|..::.   .|.:..:.|..|:.|....::...:...:..||..|.|||              
  Rat   951 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIY 1015

  Fly   568 EQLITVARKKYGIPIFSCK--GDVEKLCK-CITAGFFTQVAYLHHSGVYRQISSGTELAIHPNST 629
            |..:........:|...|.  .:.|:|.| .:.||.:..:..:....|.||..      ..|||.
  Rat  1016 EAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGK------FKPNSV 1074

  Fly   630 LYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLT 664
            .|....      |.:|..........|.::..|||
  Rat  1075 TYRTKS------GNILLHKSTINREATRLRSRWLT 1103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 205/685 (30%)
DEXDc 64..202 CDD:238005 60/144 (42%)
HELICc 289..380 CDD:197757 45/90 (50%)
HA2 448..534 CDD:214852 17/100 (17%)
OB_NTP_bind <581..670 CDD:285018 20/87 (23%)
Dhx30XP_006243888.1 DEXDc 466..645 CDD:214692 75/186 (40%)
DEXDc 480..621 CDD:238005 59/142 (42%)
HELICc 714..813 CDD:197757 46/99 (46%)
HA2 885..968 CDD:214852 13/87 (15%)
OB_NTP_bind 1008..1130 CDD:285018 21/108 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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