DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and l(2)37Cb

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster


Alignment Length:672 Identity:287/672 - (42%)
Similarity:414/672 - (61%) Gaps:21/672 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AITDSAGGEQQSS---AFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKS 77
            |:|.....|:.||   .........:.|.|.|..||:..:::.::..:::|||:|:.|||||||:
  Fly   218 ALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKT 282

  Fly    78 TQVPQYLYEWGW-HTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIK 141
            |||||||.|.|: ..|.:||.|:||||:.:::|.|||:|.|..:|:.|||.:||.:..|..|.:|
  Fly   283 TQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILK 347

  Fly   142 FMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASF 206
            :||:|.|.||.|::|.|..|.|:|:||||||.:.||::.||:|.|.|.|..|||:|||||:||..
  Fly   348 YMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEK 412

  Fly   207 FSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQ 271
            ||.||      :.:....|.||.:||..||...|.|||:.....:|.::|..:|.||||.|||||
  Fly   413 FSAFF------DDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQ 471

  Fly   272 EEVLEALDLLREYI--ASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITI 334
            :|:....::|.:.:  ..|:...|.|:|:|.::.|..|..:|...|...|||:|||||||||:||
  Fly   472 DEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTI 536

  Fly   335 PGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYE-ALA 398
            ..|:||||.|:.|...:|.:|..:||::||:|||||.||||||||..|||.:||||...|: .|.
  Fly   537 DNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELE 601

  Fly   399 PRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVG 463
            ....||::|..|..|:|.||||||.:::.|||..|||.:.|:.|||.|:||.|::..|.||| :|
  Fly   602 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTK-LG 665

  Fly   464 YLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQS-IFSRPASAVAQQSGRIAHRKFEVAE 527
            ..:||.|...|:.|||..|.:..||||::||.|:|.|.| ||.||...:....  .|.:.|....
  Fly   666 RRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHAD--TARKNFNHMH 728

  Fly   528 GDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEKL 592
            ||.:::|..|..:.|...:.::|.:.|:.||::|||..:||||:.: .::..|.:.||..:...:
  Fly   729 GDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGL-MQRVEIDMVSCLPETVNV 792

  Fly   593 CKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLY-TLPQAQYVVYGELLQTTKLFMNYVT 656
            .|..|||:|..||.|...|.|:.|.....:.|||||:|: .||  ::|:|.||:.|:|.:|..|.
  Fly   793 RKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELP--RWVLYHELVFTSKEYMRQVI 855

  Fly   657 VIKREWLTELAPHYYQQTTVRD 678
            .|:.:||.|:|||||:...:.|
  Fly   856 EIESKWLLEVAPHYYKAKELED 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 276/633 (44%)
DEXDc 64..202 CDD:238005 75/138 (54%)
HELICc 289..380 CDD:197757 47/90 (52%)
HA2 448..534 CDD:214852 34/86 (40%)
OB_NTP_bind <581..670 CDD:285018 35/89 (39%)
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 279/656 (43%)
DEXDc 269..408 CDD:238005 75/138 (54%)
HELICc 491..581 CDD:197757 46/89 (52%)
HA2 651..735 CDD:214852 34/86 (40%)
OB_NTP_bind 770..869 CDD:285018 38/101 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468093
Domainoid 1 1.000 45 1.000 Domainoid score I722
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13788at6656
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm51353
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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