DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and l(1)G0007

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster


Alignment Length:639 Identity:261/639 - (40%)
Similarity:392/639 - (61%) Gaps:21/639 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVS 104
            :.|||..||:...|.::|..:.::.|:|:||||||||:||:.|||:|.|:..:|:||.|:||||:
  Fly   527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVA 591

  Fly   105 TVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEA 169
            .:::|.||:.|....:|:.|||.:||.:..|..|.||:||:||||||.|.||.|..|..||:|||
  Fly   592 AMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEA 656

  Fly   170 HERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSN 234
            |||::.||::.|||::|:.:|..||||::|||:|:|.|:.||     |.|.. .:|.||..||..
  Fly   657 HERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFF-----GNVPT-FTIPGRTFPVDV 715

  Fly   235 FYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQEN---LKVL 296
            .:....|.|||:..|:...::|.....||:|.|:.|||::....::|.|.:|  |.:|   |.:|
  Fly   716 MFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLA--EIDNAPALSIL 778

  Fly   297 PMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLV 361
            |:|..:.|..|..:|.....|.||.|:||||||||:|:.||:||||.||.|:|.|||:...|:|.
  Fly   779 PIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQ 843

  Fly   362 IVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDY-EALAPRQPPEMRRSELSGAILQLKALGIGNI 425
            |.|:|:|:|.||:|||||..||:.|||||:..| :.|.....||::|:.|:..:|.||:||:.::
  Fly   844 IYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDL 908

  Fly   426 LRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEE 490
            |:|.|..|||..|:|::|..|:.|.|:|..|.|| .:|..:||.|......:||.|:.:||||.|
  Fly   909 LQFHFMDPPPQDNILNSLYQLWILGALDHTGALT-TLGRQMAEFPLDPPQCQMLIVACRMGCSAE 972

  Fly   491 IITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFL 555
            ::.|:::|.|.|||.||.....:..|  ...||:..|.|.:|.||.|..:.:...:..:|.::|:
  Fly   973 VLIIVSMLSVPSIFYRPKGREDEADG--VREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFI 1035

  Fly   556 IYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGT 620
            ..:.:::...:|:||..:..:: .:.:.||..|.:.:.|||.:.:|.|.|.|...|.|..:.:|.
  Fly  1036 HIKAMRKVREVRQQLKDIMTQQ-NLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGM 1099

  Fly   621 ELAIHPNSTLY---TLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYY 671
            ...:||.|.||   |.|  .||||.||:.|.|.:|...|.:...||.||.|.::
  Fly  1100 PCHLHPTSALYGLGTTP--DYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFF 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 260/634 (41%)
DEXDc 64..202 CDD:238005 73/137 (53%)
HELICc 289..380 CDD:197757 48/93 (52%)
HA2 448..534 CDD:214852 32/85 (38%)
OB_NTP_bind <581..670 CDD:285018 35/91 (38%)
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 93/191 (49%)
DEXDc 551..689 CDD:238005 73/137 (53%)
HELICc 722..870 CDD:238034 68/149 (46%)
HA2 932..1014 CDD:214852 32/84 (38%)
OB_NTP_bind 1048..1148 CDD:285018 36/102 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468091
Domainoid 1 1.000 45 1.000 Domainoid score I722
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13788at6656
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm51353
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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