DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and CG1582

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001285098.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster


Alignment Length:762 Identity:221/762 - (29%)
Similarity:349/762 - (45%) Gaps:161/762 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGL---------- 94
            :::.|::||.....::||..:|...||::.||||.||||||||::.: .|..:.|          
  Fly   446 IIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILD-NWFFRALQLPAKENLPH 509

  Fly    95 --IGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPL 157
              |..|:|||:|.:.:|.|||.||.:.:|..|||.:|....:|..|::.|.|.|||||.:.:|||
  Fly   510 VEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPL 574

  Fly   158 LTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVK 222
            |.....:||||.|||:..:|.:|.:||.:||:|..||:|:.|||::|:.||::|   |...|   
  Fly   575 LGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYF---GGAPV--- 633

  Fly   223 LSIEGRMHPVSNFYLNE--------------PC-------------------------------- 241
            |.|.||..||...:|.:              .|                                
  Fly   634 LDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIK 698

  Fly   242 -------------ADYVKETVETVWKL---------------------HQKEPPGDILAFLTGQE 272
                         |:|.|.|.::::.:                     |.....|.||.||.|..
  Fly   699 DEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFG 763

  Fly   273 EVLEALD-LLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPG 336
            |:....| ||...:.|.......::|::.::|..||..||...|.|.||:||:|||||||:||..
  Fly   764 EIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDD 828

  Fly   337 IVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQ 401
            .|:|:|||.:|.|.::.....:||.:|.||:|:|.||.|||||:.||....|||...|:.....|
  Fly   829 CVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQ 893

  Fly   402 P-PEMRRSELSGAILQLKAL---GIGNILR--FDFPSPPPAQNLLSALESLFALDAIDEQGNLTK 460
            | ||::|..|...:|::|.|   ...|.|.  .:....|...::|.||..|..:.|:|.:..|| 
  Fly   894 PVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLT- 957

  Fly   461 PVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEV 525
            |:|:.||.||....:.|::.......|.:.::||.|.|..:|.|..|.:...:...  ..|.|.:
  Fly   958 PLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADK--CKRMFAL 1020

  Fly   526 AEGDFITMLNAYTGFVE------EGMTKEFCGQYFLIYRNLKRAHSLR----EQLITVARKKYGI 580
            ...|.:|:||||..:::      ...::.:..::||....|:....|:    |.|:::......:
  Fly  1021 GNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDV 1085

  Fly   581 P---------IFSCKGDVEK-------------LCKCI----------------TAGFFTQVAYL 607
            |         |.:..| ||:             ||..:                |||........
  Fly  1086 PRRRKNACDNILTLTG-VEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPS 1149

  Fly   608 HHSGVYRQISSGTELAIHPNS--TLYTLPQAQYVVYGELLQTTKLFM 652
            ||...::....| .:.|||:|  :..::.||.::|:.|.::|:.:::
  Fly  1150 HHDLRFKTRGDG-YVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYI 1195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 221/762 (29%)
DEXDc 64..202 CDD:238005 65/149 (44%)
HELICc 289..380 CDD:197757 41/90 (46%)
HA2 448..534 CDD:214852 23/85 (27%)
OB_NTP_bind <581..670 CDD:285018 22/112 (20%)
CG1582NP_001285098.1 UBA_like_SF 123..154 CDD:304366
zf-CCCH 250..272 CDD:279036
RWD <284..360 CDD:283440
HrpA 419..1206 CDD:224557 221/762 (29%)
DEXDc 471..619 CDD:238005 65/148 (44%)
HELICc 781..871 CDD:197757 40/89 (45%)
HA2 948..1029 CDD:214852 23/83 (28%)
OB_NTP_bind 1070..1212 CDD:285018 24/128 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468089
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.