Protein Alignment CG3225 and Tdrd9

DIOPT Version :10

• Sequence 1: NP_608860.1
• Gene: CG3225 / 33680
• FlyBaseID: FBgn0031631
• Length: 678
• Species: Drosophila melanogaster
• Sequence 2: XP_017450003.1
• Gene: Tdrd9 / 299343
• RGDID: 1306942
• Length: 1396
• Species: Rattus norvegicus
• Alignment Length: 564
• Identity: 160/564 - (28%)
• Similarity: 275/564 - (48%)
• Gaps: 87/564 - (15%)

  Fly    47 LPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGL--IGITEPRRVSTVTLA 109
            |||.:.:::::..:|.:.|||:.|.||||||||:|||:.:........  |.:|:||::...::|
  Rat   134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKIGASSIA 198

  Fly   110 NRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNM 174
            ..:::||...:|..|||.|...::.:..|::.:||.|:||:::::...|.::..:.:||.|||..
  Rat   199 RWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFTHVFIDEVHERTE 263

  Fly   175 LTDMILGLLKKILRKRSS-LKLIISSATIDASFFSEFFSWPGSGEV--SVKLSIEGRMHPVSNFY 236
            ..|.:|.:::|:||..|. :|:|:.||||:...|:::|:.|...::  :....:||:.|.:..:|
  Rat   264 EMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGKPHTIEQYY 328

  Fly   237 LNEPCADY---------------------------------VKETVETVWKLHQ-KEPPGDILAF 267
            ||:....|                                 :||:....|...| ......:|.|
  Rat   329 LNDLGHIYHSGLPPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFVSERSSVLVF 393

  Fly   268 LTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSI 332
            |.|..|:    :.:.|.:.:...:.|:|.|::.|::..:|.:||.:|..|.||::|:|||||:|:
  Rat   394 LPGLGEI----NYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSV 454

  Fly   333 TIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEAL 397
            |:|.:.||||....:....:..|...||.:...||.|..||.|||||:..|..|||..:..:::.
  Rat   455 TVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSA 519

  Fly   398 AP-RQPPEMRRSELSGAILQLKALGIG--NILRFDFPSPPPAQNL---LSALESLFAL------- 449
            .| ...|||.|..|...:|::|.|.:|  ..|.....|||...::   :..|:.:.||
  Rat   520 IPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQRE 584

  Fly   450 DAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRP------- 507
            |.....|.||. :|.:||:||.|..|.|::.:....||.:|.:.|.|.|.:::.|:.|
  Rat   585 DENPHDGELTF-LGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTMPFRQHLDG 648

  Fly   508 -----------------------ASAVAQQSGRIAHRKFEVAEG 528
                                   |....:|.|.:.|.|.|:..|
  Rat   649 YRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWG 692

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3225	NP_608860.1	HrpA	38..>669	CDD:441249	160/564 (28%)
Tdrd9	XP_017450003.1	HrpA	132..>707	CDD:441249	160/564 (28%)
		DEAD-like_helicase_N	134..317	CDD:475120	58/182 (32%)
		Tudor_TDRD9	919..1018	CDD:410502