DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and Dhx16

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:687 Identity:295/687 - (42%)
Similarity:428/687 - (62%) Gaps:25/687 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPKF-LKPETDDAI-----TDSAGGEQQSSA--FVFNVNHNMGLMEQRERLPIRQYRDQILYCLE 61
            :|:: |..|.|:.|     ....|.|:.||.  ..........:...|..||:..:|:::|..:.
  Rat   352 EPQYQLVLEEDETIEFVRAAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIA 416

  Fly    62 KHQVVILVGETGSGKSTQVPQYLYEWGWHTKGL-IGITEPRRVSTVTLANRVAQERGELVGDTVG 125
            .|||:|:.|||||||:||:||||:|.|:..||: |..|:||||:.:::|.|||:|.|..:|:.||
  Rat   417 NHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVG 481

  Fly   126 YVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKR 190
            |.:||.:..|..|.:::||:|:||||.|::|.|..|.|::|||||||.:.||::.||:|.:.|.|
  Rat   482 YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 546

  Fly   191 SSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKL 255
            ..||::::|||:|.:.||.||      :.:....|.||..||..||...|.|||::..|.:|.::
  Rat   547 PELKVLVASATLDTARFSAFF------DDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQI 605

  Fly   256 HQKEPPGDILAFLTGQEEVLEALDLLREYI--ASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGT 318
            |..:||||||.|||||||:..|.::|::..  ..|:...|.|||:|.::.|..|..:|...|.|.
  Rat   606 HVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 670

  Fly   319 RKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPG 383
            ||||:||||||||:||.||:||:|.|:.|.|.|||:|..:||.:.|.|||||.||||||||:..|
  Rat   671 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 735

  Fly   384 KVYRLYTKSDYE-ALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLF 447
            |.:||||...|: .|.....||::|:.|...:|.||:|||.:::.|||..|||.:.||.|||.|:
  Rat   736 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 800

  Fly   448 ALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQV-QSIFSRPASAV 511
            ||.|::..|.||.. |..:||||...|||||:..|.:..|||||:|:.|:|.| .|||.||...|
  Rat   801 ALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 864

  Fly   512 AQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARK 576
            .....  |...|.:..||.:.:||.||.:.|.|.:.::|.:.|:.:|:::||..:||||..:. :
  Rat   865 VHADN--ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL-E 926

  Fly   577 KYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVY 641
            :..:.:.||:||..::.|.||:|:|...|.|..|| ||.:.....:.|||||:|:. .|.::::|
  Rat   927 RVEVGLTSCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE-QQPRWLLY 989

  Fly   642 GELLQTTKLFMNYVTVIKREWLTELAPHYYQQTTVRD 678
            .||:.|||.||..|..|:..||.|:|||||:...:.|
  Rat   990 HELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 280/632 (44%)
DEXDc 64..202 CDD:238005 70/138 (51%)
HELICc 289..380 CDD:197757 51/90 (57%)
HA2 448..534 CDD:214852 36/86 (42%)
OB_NTP_bind <581..670 CDD:285018 37/88 (42%)
Dhx16NP_997661.1 DEXDc 402..584 CDD:214692 86/187 (46%)
DEXDc 419..558 CDD:238005 70/138 (51%)
HELICc 583..740 CDD:238034 79/156 (51%)
HA2 801..885 CDD:214852 36/86 (42%)
OB_NTP_bind 920..1018 CDD:285018 39/100 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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