DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and SPAC20H4.09

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_593629.1 Gene:SPAC20H4.09 / 2542874 PomBaseID:SPAC20H4.09 Length:647 Species:Schizosaccharomyces pombe


Alignment Length:643 Identity:252/643 - (39%)
Similarity:401/643 - (62%) Gaps:18/643 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTK-GLIGITEP 100
            |..|..|::.|||.:||:|:||.:|::|:.|::|.||.||:||:||:|||.||.:: |:||.|:|
pombe    15 NTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQP 79

  Fly   101 RRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVII 165
            ||:...:::.||:.|.....|...||.::|..::|..||||:||:||||.|:..||||.:|.::|
pombe    80 RRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVI 144

  Fly   166 VDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMH 230
            :||.|||.:.||::||:||:||.||:..:|::|||::||:..|:||   |..:|.. :||||::.
pombe   145 LDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFF---GQDKVCT-MSIEGKLF 205

  Fly   231 PVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYI--ASSEQENL 293
            ||...:|.:|..:||...:|||..::...||||||.||:|::|:...:..:.:.:  ||.:.:.|
pombe   206 PVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTL 270

  Fly   294 KVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSD 358
            ..||::..::..:|:.||.......|||:.:||||||||||.|||||:|.|:.|.:.|||.|.:.
pombe   271 VPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTS 335

  Fly   359 SLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIG 423
            .|:.||:||:|||||:|||||...|||:||||:..|..:......::...::|..:|.||.||:.
pombe   336 KLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLK 400

  Fly   424 NILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCS 488
            |||:|.|...||..:|::|||.|:.|..:||.||||.|:|..::.....|.:||.|..|.|.||:
pombe   401 NILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCT 465

  Fly   489 EEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQY 553
            .||::|.::|....:|..|.|: ::....:||..|...|||.||.||.:..||......::|.:.
pombe   466 HEILSIASILTAGEVFYNPTSS-SKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKN 529

  Fly   554 FLIYRNLKRAHSLREQLITVARKKYGIPIFS--CKGDVEKLCKCITAGFFTQVAYLHHSGVYRQI 616
            :|.|:.|::|..:|..|:... .|:.||...  ...|..|:.||:..||...||:|.:.|.|:.|
pombe   530 YLNYQTLRQALDIRTHLVRFL-NKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTI 593

  Fly   617 SSGTELAIHPNSTLYTLPQAQYVVYGELLQT-TKLFMNYVTVIKREWLTELAPHYYQQ 673
             .|.::.:..:|.|:. .:..:::|...::: |::|:..::.|:..||.:    ||::
pombe   594 -GGKQVWLDSSSVLHE-KKTPWIMYSSAVESETQIFVKNISKIESFWLDK----YYKR 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 249/633 (39%)
DEXDc 64..202 CDD:238005 67/138 (49%)
HELICc 289..380 CDD:197757 45/90 (50%)
HA2 448..534 CDD:214852 32/85 (38%)
OB_NTP_bind <581..670 CDD:285018 22/91 (24%)
SPAC20H4.09NP_593629.1 DEXDc 16..208 CDD:214692 90/195 (46%)
DEXDc 42..179 CDD:238005 65/136 (48%)
Helicase_C 221..356 CDD:278689 59/134 (44%)
HA2 426..510 CDD:214852 32/84 (38%)
OB_NTP_bind <569..639 CDD:285018 17/71 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 200 1.000 Domainoid score I660
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6406
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.780

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