DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and Dhx29

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_766182.2 Gene:Dhx29 / 218629 MGIID:2145374 Length:1365 Species:Mus musculus


Alignment Length:743 Identity:229/743 - (30%)
Similarity:351/743 - (47%) Gaps:144/743 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLY------EWGWHTKGLIGIT 98
            |:::|::||:.::||.|:..|::|:||::.||||||||||||.:|.      |.|.....:: .|
Mouse   564 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIV-CT 627

  Fly    99 EPRRVSTVTLANRVAQERGELVG-----DTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLL 158
            :|||:|.|:||.||.:|.|...|     ...||.:|.....|..|::.:.|.|:|||::..|.||
Mouse   628 QPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLL 692

  Fly   159 TQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKL 223
            .....:||||.|||::.:|.:|.:||:||:|||.|.||:.|||:|:..||.:|:.      ...|
Mouse   693 ADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTH------CPIL 751

  Fly   224 SIEGRMHPVSNFYL--------------NEPCADYVKETVETV---------WKLHQKEPP---- 261
            .|.||.:||..|:|              :|.|..:::|..|..         .|.:|:..|    
Mouse   752 RISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVKKYQEYIPVQSG 816

  Fly   262 --------------------------------------------------GDILAFLTGQEEVLE 276
                                                              |.:|.||.|...:.:
Mouse   817 ASPELNPFYQKYSSRTQHAILYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQ 881

  Fly   277 ALDLLREYIASSEQ----ENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGI 337
            ..|||     ||::    |..:|:.::..:|:.||.:.|..||.|.||:|||||||||.||||.:
Mouse   882 LYDLL-----SSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDV 941

  Fly   338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQP 402
            |:|||.|..|...|:..:...|||...||||||:||.|||||:|.|..:||||:..:|.......
Mouse   942 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSV 1006

  Fly   403 PEMRRSELSGAILQLKALGIGNILRFDFPS----PPPAQNLLSALESLFALDAIDEQGNLTKPVG 463
            ||:.|..|....|.:....:|:  ..||.|    ||..|.:.:|:..|..:.|.:.......|:|
Mouse  1007 PEILRVPLEELCLHIMKCDLGS--PEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLG 1069

  Fly   464 YLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEG 528
            ..||.||.:..:.|||......||.|.:.|:.|::..:|.|..|..  .:....:|.....||:.
Mouse  1070 QHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG--RKDEADLAKSSLAVADS 1132

  Fly   529 DFITMLNAYTGF----VEEGMTKE--FCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSC-- 585
            |.:|:.|||.|:    .|.|...|  :|.:.||...:|.....::::|:.:. |..|   ||.  
Mouse  1133 DHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLV-KAAG---FSSSP 1193

  Fly   586 -----KG-------DVEKLCKCITAGFFTQVAYL---HHSGVYRQISSGTELA-----IHPNSTL 630
                 ||       |:..|...:.||.:..|..:   ....|..:::...|.|     :||:|..
Mouse  1194 SWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVN 1258

  Fly   631 YTLPQAQYVVYGELLQTTKLFMNYVTVI 658
            ..|....:::|.|.::.|::::...|:|
Mouse  1259 RDLQTYGWLLYQEKVRYTRVYLRETTLI 1286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 229/743 (31%)
DEXDc 64..202 CDD:238005 64/148 (43%)
HELICc 289..380 CDD:197757 46/94 (49%)
HA2 448..534 CDD:214852 23/85 (27%)
OB_NTP_bind <581..670 CDD:285018 21/100 (21%)
Dhx29NP_766182.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..222
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..257
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..524
DEXDc 577..763 CDD:214692 80/192 (42%)
DEXDc 588..735 CDD:238005 63/147 (43%)
DEAH box. /evidence=ECO:0000255|HAMAP-Rule:MF_03068 701..704 2/2 (100%)
Helicase_C 863..984 CDD:278689 56/125 (45%)
HA2 1055..1136 CDD:214852 22/82 (27%)
OB_NTP_bind 1178..1298 CDD:285018 24/113 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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