DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and Dhx29

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_002729053.2 Gene:Dhx29 / 100362324 RGDID:2318361 Length:1366 Species:Rattus norvegicus


Alignment Length:740 Identity:225/740 - (30%)
Similarity:347/740 - (46%) Gaps:138/740 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYE------WGWHTKGLIGIT 98
            |:::|::||:.::|..|:..|::|:||::.||||||||||||.:|.|      .|.....:: .|
  Rat   565 LLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIV-CT 628

  Fly    99 EPRRVSTVTLANRVAQERGELVG-----DTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLL 158
            :|||:|.|:||.||.:|.|...|     ...||.:|.....|..|::.:.|.|:|||::..|.||
  Rat   629 QPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLL 693

  Fly   159 TQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKL 223
            .....:||||.|||::.:|.:|.:||:||:|||.|.||:.|||:|:..||.:|:.      ...|
  Rat   694 ADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTH------CPIL 752

  Fly   224 SIEGRMHPVSNFYL--------------NEPCADYVKE----TVETVWKL--------------- 255
            .|.||.:||..|:|              :|.|..:::|    |:....|.               
  Rat   753 RISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQECIPVQSG 817

  Fly   256 -------------------------HQ--------------KEP-----PGDILAFLTGQEEVLE 276
                                     |:              |.|     .|.:|.||.|...:.:
  Rat   818 ASPELSPFYQKYSSRTQYAVLYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQ 882

  Fly   277 ALDLL----REYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGI 337
            ..|||    |.|     .|..:::.::..:|:.||.:.|..||.|.||:|||||||||.||||.:
  Rat   883 LYDLLSNDRRFY-----SERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDV 942

  Fly   338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQP 402
            |:|||.|..|...|:..:...|||...||||||:||.|||||:|.|..:||||:..:|.......
  Rat   943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSV 1007

  Fly   403 PEMRRSELSGAILQLKALGIGNILRFDFPS----PPPAQNLLSALESLFALDAIDEQGNLTKPVG 463
            ||:.|..|....|.:....:|:  ..||.|    ||..|.:.:|:..|..:.|.:.......|:|
  Rat  1008 PEILRVPLEELCLHIMKCDLGS--PEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLG 1070

  Fly   464 YLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEG 528
            ..||.||.:..:.|||......||.|.:.|:.|::..:|.|..|..  .:....:|.....||:.
  Rat  1071 QHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG--RKDEADLAKSSLAVADS 1133

  Fly   529 DFITMLNAYTGF----VEEGMTKE--FCGQYFLIYRNLKRAHSLREQLITVARK----------- 576
            |.:|:.|||.|:    .|.|...|  :|.:.||...:|.....::::|:.:.|.           
  Rat  1134 DHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSWEG 1198

  Fly   577 KYGIPIFSCKGDVEKLCKCITAGFFTQVAYL---HHSGVYRQISSGTELA-----IHPNSTLYTL 633
            |.|....|.: |:..|...:.||.:..|..:   ....|..:::...|.|     :||:|....|
  Rat  1199 KKGPQALSFQ-DIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVNRDL 1262

  Fly   634 PQAQYVVYGELLQTTKLFMNYVTVI 658
            ....:::|.|.::..::::...|:|
  Rat  1263 QTYGWLLYQEKVRYARVYLRETTLI 1287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 225/740 (30%)
DEXDc 64..202 CDD:238005 64/148 (43%)
HELICc 289..380 CDD:197757 45/90 (50%)
HA2 448..534 CDD:214852 23/85 (27%)
OB_NTP_bind <581..670 CDD:285018 17/86 (20%)
Dhx29XP_002729053.2 HrpA 531..1314 CDD:224557 225/740 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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