Protein Alignment CG3225 and Dhx29

DIOPT Version :10

• Sequence 1: NP_608860.1
• Gene: CG3225 / 33680
• FlyBaseID: FBgn0031631
• Length: 678
• Species: Drosophila melanogaster
• Sequence 2: NP_001414443.1
• Gene: Dhx29 / 100362324
• RGDID: 2318361
• Length: 1366
• Species: Rattus norvegicus
• Alignment Length: 740
• Identity: 225/740 - (30%)
• Similarity: 347/740 - (46%)
• Gaps: 138/740 - (18%)

  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYE------WGWHTKGLIGIT 98
            |:::|::||:.::|..|:..|::|:||::.||||||||||||.:|.|      .|.....:: .|
  Rat   565 LLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIV-CT 628

  Fly    99 EPRRVSTVTLANRVAQERGELVG-----DTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLL 158
            :|||:|.|:||.||.:|.|...|     ...||.:|.....|..|::.:.|.|:|||::..|.||
  Rat   629 QPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLL 693

  Fly   159 TQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKL 223
            .....:||||.|||::.:|.:|.:||:||:|||.|.||:.|||:|:..||.:|:.      ...|
  Rat   694 ADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTH------CPIL 752

  Fly   224 SIEGRMHPVSNFYL--------------NEPCADYVKE----TVETVWKL--------------- 255
            .|.||.:||..|:|              :|.|..:::|    |:....|.
  Rat   753 RISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQECIPVQSG 817

  Fly   256 -------------------------HQ--------------KEP-----PGDILAFLTGQEEVLE 276
                                     |:              |.|     .|.:|.||.|...:.:
  Rat   818 ASPELSPFYQKYSSRTQYAVLYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQ 882

  Fly   277 ALDLL----REYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGI 337
            ..|||    |.|     .|..:::.::..:|:.||.:.|..||.|.||:|||||||||.||||.:
  Rat   883 LYDLLSNDRRFY-----SERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDV 942

  Fly   338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQP 402
            |:|||.|..|...|:..:...|||...||||||:||.|||||:|.|..:||||:..:|.......
  Rat   943 VFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSV 1007

  Fly   403 PEMRRSELSGAILQLKALGIGNILRFDFPS----PPPAQNLLSALESLFALDAIDEQGNLTKPVG 463
            ||:.|..|....|.:....:|:  ..||.|    ||..|.:.:|:..|..:.|.:.......|:|
  Rat  1008 PEILRVPLEELCLHIMKCDLGS--PEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLG 1070

  Fly   464 YLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEG 528
            ..||.||.:..:.|||......||.|.:.|:.|::..:|.|..|..  .:....:|.....||:.
  Rat  1071 QHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG--RKDEADLAKSSLAVADS 1133

  Fly   529 DFITMLNAYTGF----VEEGMTKE--FCGQYFLIYRNLKRAHSLREQLITVARK----------- 576
            |.:|:.|||.|:    .|.|...|  :|.:.||...:|.....::::|:.:.|.
  Rat  1134 DHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSWEG 1198

  Fly   577 KYGIPIFSCKGDVEKLCKCITAGFFTQVAYL---HHSGVYRQISSGTELA-----IHPNSTLYTL 633
            |.|....|.: |:..|...:.||.:..|..:   ....|..:::...|.|     :||:|....|
  Rat  1199 KKGPQALSFQ-DIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVNRDL 1262

  Fly   634 PQAQYVVYGELLQTTKLFMNYVTVI 658
            ....:::|.|.::..::::...|:|
  Rat  1263 QTYGWLLYQEKVRYARVYLRETTLI 1287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3225	NP_608860.1	HrpA	38..>669	CDD:441249	225/740 (30%)
Dhx29	NP_001414443.1	None