DRSC/TRiP Functional Genomics Resources

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Protein Alignment slf and si:dkey-88n24.8

DIOPT Version :9

Sequence 1:NP_001260046.1 Gene:slf / 33678 FlyBaseID:FBgn0287234 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001025264.1 Gene:si:dkey-88n24.8 / 555745 ZFINID:ZDB-GENE-041014-92 Length:314 Species:Danio rerio


Alignment Length:168 Identity:34/168 - (20%)
Similarity:62/168 - (36%) Gaps:55/168 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NKKVDWLDGRNLCREYCMDLVALETQEKNNLIFRVI--QQNDVPYIWTAGRICDFAGCENRPDLE 129
            |:.::|.|.::.||:...|||::..|.:|..:.:.|  :.:....:| .|...|           
Zfish    87 NQMMNWRDAQSYCRQNHTDLVSVRNQNENQQLEKFIHDRNSSGSAVW-IGLFRD----------- 139

  Fly   130 PKTVYGWFWSATREKIQATNRIPQGWGYNPWSQTGHKKRPQPDNAEYDINQTKEQCLSVLNNVYN 194
                 .|.||      ..:|...:.|                |..|.:.::..|.| :|:|....
Zfish   140 -----TWQWS------DQSNSSFRYW----------------DTIEPNNDKGCEDC-TVINKYAQ 176

  Fly   195 DGIAWHDV--------ACYHEKPVICEDN---EELLRY 221
            .  .|:|:        .|:.:|.::.:.|   .|.|||
Zfish   177 R--RWNDIPCGLTFSFVCHEDKLIVIQQNLSWSEALRY 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slfNP_001260046.1 CLECT 67..213 CDD:153057 29/155 (19%)
si:dkey-88n24.8NP_001025264.1 CLECT <1..78 CDD:321932
CLECT_1 83..193 CDD:153072 27/147 (18%)
CLECT 199..311 CDD:153057 5/14 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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