DRSC/TRiP Functional Genomics Resources

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Protein Alignment slf and LOC110439916

DIOPT Version :9

Sequence 1:NP_001260046.1 Gene:slf / 33678 FlyBaseID:FBgn0287234 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_021333339.1 Gene:LOC110439916 / 110439916 -ID:- Length:223 Species:Danio rerio


Alignment Length:160 Identity:33/160 - (20%)
Similarity:58/160 - (36%) Gaps:52/160 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 WLDGRNLCREYCMDLVALETQEKNNLIFRVIQQN--DVPYIWTAGRICDFAGCENRPDLEPKTVY 134
            |...::.||:..:|||::..|.:|..:.:.|.::  ....:|        .|..:.|        
Zfish     3 WRAAQSYCRQNHIDLVSVRNQNENQQLEKFINESKKSGSSVW--------IGLFSDP-------- 51

  Fly   135 GWFWSATREKIQATNRIPQGWGYNPWSQTGHKKRPQPDN----AEYDINQ-TKEQCLSVLNNVYN 194
             |.||                     .|:....|...||    |:..:.| .|::.....||||:
Zfish    52 -WQWS---------------------DQSNSSFRYWADNFIDLADCAVIQPNKQRRWGDYNNVYH 94

  Fly   195 DGIAWHDVACYHEKPVICEDN---EELLRY 221
            .    :...|:.:|.::.:.|   .|.|||
Zfish    95 Q----YAFVCHEDKLIVIQQNLSWSEALRY 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slfNP_001260046.1 CLECT 67..213 CDD:153057 28/147 (19%)
LOC110439916XP_021333339.1 CLECT 1..101 CDD:321932 26/139 (19%)
CLECT 107..221 CDD:153057 5/14 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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