DRSC/TRiP Functional Genomics Resources

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Protein Alignment slf and LOC103911305

DIOPT Version :9

Sequence 1:NP_001260046.1 Gene:slf / 33678 FlyBaseID:FBgn0287234 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_021333760.1 Gene:LOC103911305 / 103911305 -ID:- Length:205 Species:Danio rerio


Alignment Length:179 Identity:32/179 - (17%)
Similarity:58/179 - (32%) Gaps:75/179 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MFLTTHVPALAN---------KKVDWLDGRNLCREYCMDLVALETQEKNNLIFRVIQQNDVPYIW 111
            :.||...|.:::         :.:.|.:.:..||::.:||.:                       
Zfish     8 LLLTALTPTVSSQSYTFYFVAENMSWSNAQTYCRQHYIDLAS----------------------- 49

  Fly   112 TAGRICDFAGCENR-----PDLEPKTVYG---------WFWSATREKIQATNRIPQGWGYNPWSQ 162
                :.|:|..|..     ||.......|         |.||.:    ..:..||.|.|      
Zfish    50 ----VLDYADVEEALGSIDPDYYANVWIGLYRHGPTDPWLWSDS----GTSTFIPWGPG------ 100

  Fly   163 TGHKKRPQPD---NAEYDINQTKEQCLSVLNNVYNDGIAWHDVACYHEK 208
                   ||:   |::|.:...:...|:.||  .|..:::   .||.|:
Zfish   101 -------QPNNYANSQYCVELERNWVLNDLN--CNTKLSF---VCYKER 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slfNP_001260046.1 CLECT 67..213 CDD:153057 29/168 (17%)
LOC103911305XP_021333760.1 CLECT 22..135 CDD:321932 27/161 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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