DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment slf and LOC103908709

DIOPT Version :9

Sequence 1:	NP_001260046.1	Gene:	slf / 33678	FlyBaseID:	FBgn0287234	Length:	231	Species:	Drosophila melanogaster
Sequence 2:	XP_021329075.1	Gene:	LOC103908709 / 103908709	-ID:	-	Length:	370	Species:	Danio rerio

Alignment Length:	159	Identity:	36/159 - (22%)
Similarity:	58/159 - (36%)	Gaps:	48/159 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 NKKVDWLDGRNLCREYCMDLVALETQEKNNLIFRVIQQNDVPYIWTAGRICDFAGCENRPDLEPK 131
            |:.:.|.:.:..||:...||..::..|:.|.:...:..:.....| .|:..|
Zfish   250 NQSLSWTEAQRFCRQNYTDLATIDNMEEMNRLINTVNGSYNGSAW-IGQYDD------------- 300

  Fly   132 TVYGWFWSATREKIQATNRIPQGWGYNPWSQTGHKK----RPQPDNAEYDINQTKEQCLSVLNNV 192
             |..|.||...               |.:.|.|.:.    ..:|||     :..||.|      |
Zfish   301 -VNSWRWSLED---------------NDFYQEGERDYRNFYHEPDN-----SGGKELC------V 338

  Fly   193 Y--NDGIAWHDVACYHEKPVICEDNEELL 219
            |  :|| .|:||:|.:..|..|.|::..|
Zfish   339 YMNHDG-KWYDVSCDNILPFFCYDSKAFL 366

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
slf	NP_001260046.1	CLECT	67..213	CDD:153057	33/151 (22%)
LOC103908709	XP_021329075.1	CLECT	19..136	CDD:321932
		CLECT	145..235	CDD:321932
		CLECT	244..361	CDD:321932	34/152 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1038166at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010