DRSC/TRiP Functional Genomics Resources

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Protein Alignment slf and si:dkey-83f18.11

DIOPT Version :9

Sequence 1:NP_001260046.1 Gene:slf / 33678 FlyBaseID:FBgn0287234 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_021333043.1 Gene:si:dkey-83f18.11 / 100003110 ZFINID:ZDB-GENE-070705-496 Length:524 Species:Danio rerio


Alignment Length:204 Identity:40/204 - (19%)
Similarity:60/204 - (29%) Gaps:76/204 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HAARTTTTTATKPGRFLSLPVPAKCAS------------RPKEFSYRGKNMFLTTHVPALANKKV 70
            |......|.|.|.|.....|.|.:|.|            |...|                .|:..
Zfish   146 HQTEDRNTPALKNGPISRFPPPPRCVSFTALCSISECVQRQYHF----------------INEMK 194

  Fly    71 DWLDGRNLCREYCMDLVALETQEKNNLIFRVIQQNDVPYIWTAGRICDFAGCENRPDLEPKTVYG 135
            .|.:.:..|||...||..::.......:.:.::.|| ..:|..              |:.|    
Zfish   195 TWTEAQRYCREKYTDLATVDNMNDMIQLMKSVKVND-RGVWIG--------------LQRK---- 240

  Fly   136 WFWSATREKIQATNRIPQGWGYNPWSQTGHKKRPQPDNAEYDINQTKEQCLSVLNNVYNDG---I 197
            |.||:      ....:...||           ..|||.|        ::|..:.|..:.||   .
Zfish   241 WQWSS------GDPALFLHWG-----------NEQPDGA--------DECAFMRNGQWEDGKCND 280

  Fly   198 AWHDVACYH 206
            :|..| ||:
Zfish   281 SWIFV-CYN 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slfNP_001260046.1 CLECT 67..213 CDD:153057 29/143 (20%)
si:dkey-83f18.11XP_021333043.1 CLECT 25..>68 CDD:321932
CLECT 66..>141 CDD:321932
CLECT_1 185..288 CDD:153072 30/163 (18%)
CLECT 291..403 CDD:321932
CLECT 409..521 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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