DRSC/TRiP Functional Genomics Resources

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Protein Alignment slf and si:dkey-83f18.3

DIOPT Version :9

Sequence 1:NP_001260046.1 Gene:slf / 33678 FlyBaseID:FBgn0287234 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001093551.1 Gene:si:dkey-83f18.3 / 100002910 ZFINID:ZDB-GENE-070705-502 Length:361 Species:Danio rerio


Alignment Length:166 Identity:34/166 - (20%)
Similarity:61/166 - (36%) Gaps:51/166 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NKKVDWLDGRNLCREYCMDLVALETQEKNNLIFRVIQQNDVPYIWTAGRICDFAGCENRPDLEPK 131
            |:|::|...::.||:..:|||::..|.:|..:.:.|  ||.....:|..|..|..          
Zfish   133 NQKMNWRAAQSHCRQNHIDLVSVRNQNENQQLEKFI--NDRNSSGSAVWISLFRD---------- 185

  Fly   132 TVYGWFWSATREKIQATNRIPQGWGYNPWSQTGHKKRPQPDNAEYDINQTKEQCLSVLNNVYNDG 196
               .|.||      ..:|...:.|.....:..|       .|.:|.:         ::.|.... 
Zfish   186 ---SWQWS------DQSNSSFRYWNTGEPNNVG-------GNEDYTV---------LMENTQGH- 224

  Fly   197 IAWHDVACYHEKPVICEDNE-----------ELLRY 221
              |.|::|..:.|.:|.:::           |.|||
Zfish   225 --WADISCDRQFPFVCHEDKLIVIQQNLSWSEALRY 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slfNP_001260046.1 CLECT 67..213 CDD:153057 29/145 (20%)
si:dkey-83f18.3NP_001093551.1 CLECT 23..124 CDD:295302
CLECT 127..239 CDD:295302 29/145 (20%)
CLECT 245..359 CDD:153057 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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