Protein Alignment CG3294 and u2af1

DIOPT Version :10

• Sequence 1: NP_608857.2
• Gene: CG3294 / 33677
• FlyBaseID: FBgn0031628
• Length: 456
• Species: Drosophila melanogaster
• Sequence 2: NP_001039113.1
• Gene: u2af1 / 733934
• XenbaseID: XB-GENE-877053
• Length: 243
• Species: Xenopus tropicalis
• Alignment Length: 183
• Identity: 42/183 - (22%)
• Similarity: 85/183 - (46%)
• Gaps: 19/183 - (10%)

  Fly   156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQK------RCT 214
            :|..:..|..::..|.|:.:...||:|..|:..|.:|...:.:.:.:.:.:.....      ||.
 Frog     4 YLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCA 68

  Fly   215 HKEYASAEEHLELTEQDLRHDYDEFFNDVVEEL-RKFGTIVNFRTVRNTLEHLRGHVFVEYTNER 278
                        :::.:::..|||||.:|..|: .|:|.:.......|..:||.|:|:|::..|.
 Frog    69 ------------VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE 121

  Fly   279 SALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHL 331
            .|.:|..:|..|::..:.::.|.|.:..:|.|.|......:|.:|..|.::||
 Frog   122 DAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHL 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3294	NP_608857.2	RRM_SF	197..303	CDD:473069	23/112 (21%)
u2af1	NP_001039113.1	zf-CCCH	13..39	CDD:459885	7/25 (28%)
		RRM_U2AF35	43..146	CDD:409954	23/114 (20%)
		zf-CCCH	149..175	CDD:459885	8/26 (31%)