Protein Alignment CG3294 and U2af38

DIOPT Version :10

• Sequence 1: NP_608857.2
• Gene: CG3294 / 33677
• FlyBaseID: FBgn0031628
• Length: 456
• Species: Drosophila melanogaster
• Sequence 2: NP_477208.1
• Gene: U2af38 / 33201
• FlyBaseID: FBgn0017457
• Length: 264
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 67/279 - (24%)
• Similarity: 123/279 - (44%)
• Gaps: 32/279 - (11%)

  Fly   156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTHKEYAS 220
            :|..:..|..::..|.|:.:...||:|..|:..|.:|...:.:|:::.:.:.....:       |
  Fly     4 YLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK-------S 61

  Fly   221 AE-EHL--ELTEQDLRHDYDEFFNDVVEELR-KFGTIVNFRTVRNTLEHLRGHVFVEYTNERSAL 281
            |: .||  .:::::::..||.||.||..|.. |:|.|.......|..:||.|:|::::.||..|.
  Fly    62 ADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAE 126

  Fly   282 RAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHLFGNPNNLFNTEL-EY 345
            :|..:|..|::..:.:..|.|.:..:|.|.|......:|.:...|.::||  .|   .:.|| .|
  Fly   127 KAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KP---ISRELRRY 186

  Fly   346 TSGPRSERRS-SQTPTAKTPSWDEHSEHGRNWRWSASPEVELENSKDLGNRGRDLKNNQQRNHHS 409
            ....|...|| |::|..:..|.......||.           ...:..|..|.:..||::.|...
  Fly   187 LYSRRRRARSRSRSPGRRRGSRSRSRSPGRR-----------GGGRGDGVGGGNYLNNERDNMRG 240

  Fly   410 RSRSDRSSVRSKREHSSSG 428
               :||.:.|.:|:....|
  Fly   241 ---NDRGNDRDRRKGGGGG 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3294	NP_608857.2	RRM_SF	197..303	CDD:473069	27/109 (25%)
U2af38	NP_477208.1	zf-CCCH	13..39	CDD:459885	7/25 (28%)
		RRM_U2AF35	43..148	CDD:409954	27/111 (24%)
		zf-CCCH	151..177	CDD:459885	7/27 (26%)