DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and dscama

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_021334866.1 Gene:dscama / 568643 ZFINID:ZDB-GENE-050310-7 Length:2025 Species:Danio rerio


Alignment Length:449 Identity:103/449 - (22%)
Similarity:176/449 - (39%) Gaps:97/449 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RYT-NESLIVQC--RSPDPKVELHWKSPKGEIIREHKGRIHIEQTS-TEQLKIVFAHIALADKGN 96
            ||: ...:.|.|  ||.|..:.:.|:. .|:.|....| :.|:... |..|:|  :::.....|.
Zfish   607 RYSIGHRVFVPCVVRSGDLPISITWEK-DGKSINASLG-VTIDNIDFTSSLRI--SNLQRVHNGT 667

  Fly    97 WSCEAA-DGSLHSKSFDLIVYQKITFTENATVMTVKEGEKATILCEVKGEPQPNVTWHFN---GQ 157
            ::|.|. |.::......|||.....|...........|:...:.|...|||:|.:.|.::   |.
Zfish   668 YTCIAQNDAAVVKYQSQLIVRVPPRFKVQPQDQDGIYGKSVILNCSADGEPRPTIEWKYSKGAGV 732

  Fly   158 PISAGAADDSKFRI--LADG-LLINKVTQNDTGEYACRAYQVNSIASDMQERTVLMKIEHKPIWS 219
            |.....|.:|.||:  |.:| |||..|.:.|.|.|.|:.  .|.:.:|:               |
Zfish   733 PQFQPIALNSGFRVQLLGNGSLLIKHVLEEDAGYYLCKV--SNDVGADV---------------S 780

  Fly   220 KTPFVSLKYAYI------NGTAT------LMCEALAEPPANFTWYRKHNKLHSNNRLYTIQSDSY 272
            |:.::::|...:      |..||      :.|:|..|.|....|.::..|   ..:.:.|..|.:
Zfish   781 KSMYLNVKIPAMITSYPNNSLATKGEKIEMSCKAHGEKPIMVRWEKEVEK---EKQSHMINPDMW 842

  Fly   273 WSSLTI-----HVLNT----------SAFDNYRCRARN----DLGTIERTTRLEQGEKPPSPANF 318
            ..::|:     .|::|          |.|  :.|.|.|    |.|.::.|.     ::||.|...
Zfish   843 RHTVTVKNVGDEVVSTLQIYPTMREDSGF--FSCHAINSYGEDRGILQLTV-----QEPPEPPKV 900

  Fly   319 QLRGFNSNTFDVVLSAPRGPPDSPMGVNGFRIEYMTEMEFKTDAGKWTNARR-KDYA-FEEGATF 381
            ::|.....|..:..:         ||.:|..:....::|.|.....|..||| :|.: ....||.
Zfish   901 EIREVKERTIALRWT---------MGFDGNSLITGYDIECKNKTETWERARRTRDVSPTLNQATI 956

  Fly   382 LLTNLEPDTVYLVRAASRNLAGFSDFTKVEKYKT-----------LSLEPRVSSGVKET 429
            :  .|.|.:.|.:|..::|..|.|:.:......|           ::||...|..:|.|
Zfish   957 I--ELHPSSTYNIRMFAKNHIGDSEPSNELTVTTDEADPEGPPQDVTLEAITSQSIKVT 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 20/83 (24%)
I-set 128..202 CDD:254352 24/79 (30%)
Ig 133..>193 CDD:299845 23/65 (35%)
IG_like 228..307 CDD:214653 22/109 (20%)
Ig 235..305 CDD:143165 21/94 (22%)
FN3 312..415 CDD:238020 24/104 (23%)
dscamaXP_021334866.1 Ig 124..217 CDD:325142
I-set 236..311 CDD:254352
IG_like 321..402 CDD:214653
I-set 408..502 CDD:333254
IGc2 524..579 CDD:197706
Ig 614..679 CDD:319273 17/68 (25%)
Ig_DSCAM 708..787 CDD:143211 26/95 (27%)
Ig 805..898 CDD:325142 21/102 (21%)
FN3 894..988 CDD:238020 24/104 (23%)
FN3 995..1092 CDD:238020 5/19 (26%)
fn3 1100..1186 CDD:306538
fn3 1199..1282 CDD:306538
Ig 1312..1377 CDD:319273
fn3 1405..1471 CDD:306538
FN3 1492..1563 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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