DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and paplna

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:144 Identity:41/144 - (28%)
Similarity:61/144 - (42%) Gaps:13/144 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VELHWKSPKGEIIREHKGRIHIEQTSTEQLKIVFAHIALADKGNWSCEAADG-SLHSKSFDLIVY 116
            |.:|| |..|:.:...:...|.:.|      :|...:...|.|.::|...|. ....:...|.|.
Zfish   978 VTIHW-SRAGQPLNSLRHSQHSDGT------LVIKQLTADDSGLYTCTVTDAQKFEERQVQLRVL 1035

  Fly   117 QKITFTENATVMTVKEGEKATILCEVKGEPQPNVTWHFNGQPISAGAADDSKFRILADG-LLINK 180
            ..:..|:....:.|.:|..|.:.|.|.|| ..||.|..||.|:   ..|..:..:.||| |::|.
Zfish  1036 GDLRITKAPIDVDVVQGSTAQLACVVTGE-NVNVGWSRNGVPV---RPDGHRVHVSADGTLILNN 1096

  Fly   181 VTQNDTGEYACRAY 194
            |...|.|.|.|.||
Zfish  1097 VQSVDEGTYTCNAY 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 13/62 (21%)
I-set 128..202 CDD:254352 26/68 (38%)
Ig 133..>193 CDD:299845 23/60 (38%)
IG_like 228..307 CDD:214653
Ig 235..305 CDD:143165
FN3 312..415 CDD:238020
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057
Ig_3 839..906 CDD:316449
IGc2 960..1022 CDD:197706 11/50 (22%)
I-set 1039..1121 CDD:333254 27/76 (36%)
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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