DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and Ama

DIOPT Version :10

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster


Alignment Length:345 Identity:81/345 - (23%)
Similarity:135/345 - (39%) Gaps:53/345 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIGFILNLA-ALTAVAWANHHESLSLSPAEHSVVRYTNESLIVQCRSPD-PKVELHW-----KSP 60
            |||.|..|| :|.:|..|.     .:|.....||....:|:...|...: .::.:.|     :|.
  Fly    15 LIGLIFCLAISLDSVLSAP-----VISQISKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESD 74

  Fly    61 KGEIIREHKGRIHIEQ-----TSTEQLKIVFA-------HIALADKGNWSCEAADGSLH--SKSF 111
            ...::...:..:.:..     |.||..|...|       :|.::|.|.:.|:....:..  :|..
  Fly    75 TNSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKL 139

  Fly   112 DLIVYQKITFTENATVMT-VKEGEKATILCEVKGEPQPNVTW---HFNGQPISAGAADDSKFRIL 172
            .|.:.......||....| |.||:...:.|...|.|:|.::|   |....|  ||.      .:|
  Fly   140 SLQIKTPPVIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMP--AGG------HLL 196

  Fly   173 ADGLL-INKVTQNDTGEYACRAYQVNSIASDMQERTVLMKIEHKP-IWSKTPFVSLKYAYINGTA 235
            |:..| |..|.:.|.|.|.|.|   .:......:|.:.:::|.:| |..:.|.::   ..::.:|
  Fly   197 AEPTLRIRSVHRMDRGGYYCIA---QNGEGQPDKRLIRVEVEFRPQIAVQRPKIA---QMVSHSA 255

  Fly   236 TLMCEALAEPPANFTWYRKHNKLHSNNRLYTIQSDSYWSSLTIHVLNTSA-----FDNYRCRARN 295
            .|.|.....|.....|::....|.| :|.:.:.:.:..|..|..||...:     |.:|.|.|.|
  Fly   256 ELECSVQGYPAPTVVWHKNGVPLQS-SRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATN 319

  Fly   296 DLGTIERTTRLEQGEKP-PS 314
            .||..:....|.|...| ||
  Fly   320 KLGHADARLHLFQTVIPVPS 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 17/101 (17%)
IgI_Twitchin_like 120..208 CDD:409541 26/92 (28%)
Ig strand A 120..123 CDD:409541 0/2 (0%)
Ig strand A' 127..131 CDD:409541 1/4 (25%)
Ig strand B 134..141 CDD:409541 0/6 (0%)
Ig strand C 149..154 CDD:409541 1/7 (14%)
Ig strand C' 156..159 CDD:409541 0/2 (0%)
Ig strand D 165..170 CDD:409541 0/4 (0%)
Ig strand E 173..178 CDD:409541 2/5 (40%)
Ig strand F 187..195 CDD:409541 4/7 (57%)
Ig strand G 198..208 CDD:409541 1/9 (11%)
IG_like 228..307 CDD:214653 19/83 (23%)
Ig strand B 235..239 CDD:409353 2/3 (67%)
Ig strand C 248..252 CDD:409353 0/3 (0%)
Ig strand E 274..278 CDD:409353 1/3 (33%)
Ig strand F 288..293 CDD:409353 2/4 (50%)
FN3 312..415 CDD:238020 3/4 (75%)
AmaNP_731114.2 I-set 33..143 CDD:400151 18/114 (16%)
Ig strand B 50..54 CDD:409353 0/3 (0%)
Ig strand C 63..68 CDD:409353 1/4 (25%)
Ig strand E 101..112 CDD:409353 2/10 (20%)
Ig strand F 122..127 CDD:409353 1/4 (25%)
Ig strand G 136..139 CDD:409353 1/2 (50%)
Ig_3 146..220 CDD:464046 25/84 (30%)
I-set 254..330 CDD:400151 19/76 (25%)
Ig strand B 255..259 CDD:409353 2/3 (67%)
Ig strand C 268..272 CDD:409353 0/3 (0%)
Ig strand E 298..302 CDD:409353 2/3 (67%)
Ig strand F 312..317 CDD:409353 2/4 (50%)

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