DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and LRIT3

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_940908.3 Gene:LRIT3 / 345193 HGNCID:24783 Length:679 Species:Homo sapiens


Alignment Length:392 Identity:74/392 - (18%)
Similarity:120/392 - (30%) Gaps:164/392 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ALTAVAWAN------------HHESLSLSPAEHSVVRYTNESLIVQCRS------PDPKVELHWK 58
            :|.|..||:            |:..::..|.|  .:||......:...|      |...:| .| 
Human   116 SLAAFPWASLLDMPLLRTLDLHNNKITSVPNE--ALRYLKNLAYLDLSSNRLTTLPPDFLE-SW- 176

  Fly    59 SPKGEIIREHKGRIHIEQTSTEQLKIVFAHIALADKGN-WSCEAADGSLH-SKSFDL-------- 113
                         .|:..|.:..|.:..:.|.|..:.| |.|:.     | ||..:|        
Human   177 -------------THLVSTPSGVLDLSPSRIILGLQDNPWFCDC-----HISKMIELSKVVDPAI 223

  Fly   114 -----------------IVYQ--------KITFTENATVMTVKEGEKATILCEVKGEPQPNVTW- 152
                             |::|        |.:...:||.:....|....:.|:..|.|.|.:|| 
Human   224 VLLDPLMTCSEPERLTGILFQRAELEHCLKPSVMTSATKIMSALGSNVLLRCDATGFPTPQITWT 288

  Fly   153 HFNGQPISAGAADDS-----KFRILADGLLINKVTQNDTGEYACRAYQV---------------- 196
            ..:..|::.....:|     ::.|::    :..::..|.|:|.|:|..:                
Human   289 RSDSSPVNYTVIQESPEEGVRWSIMS----LTGISSKDAGDYKCKAKNLAGMSEAVVTVTVLGIT 349

  Fly   197 -NSIASDMQERTVLMKIEHKPIWSKTPFVSLKYAYINGTATLMCEALAEPPANFTWYRKHNKLHS 260
             ..|..|..|||.    :| |.|...|.        :|.:|.:..|                   
Human   350 TTPIPPDTSERTG----DH-PEWDVQPG--------SGRSTSVSSA------------------- 382

  Fly   261 NNRLYTIQSDSYWSSLTIHVLNTSAFDNYRCRARNDLGTIERTTRLEQGEKPPSPANFQLRGFNS 325
                    |...|||   ....||:|         ...|:          .|||.|:|.|..|:|
Human   383 --------SSYLWSS---SFSPTSSF---------SASTL----------SPPSTASFSLSPFSS 417

  Fly   326 NT 327
            :|
Human   418 ST 419

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 18/114 (16%)
I-set 128..202 CDD:254352 16/96 (17%)
Ig 133..>193 CDD:299845 14/65 (22%)
IG_like 228..307 CDD:214653 11/78 (14%)
Ig 235..305 CDD:143165 10/69 (14%)
FN3 312..415 CDD:238020 9/16 (56%)
LRIT3NP_940908.3 LRR 1 56..79
leucine-rich repeat 59..82 CDD:275378