DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and Lrit3

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:319 Identity:55/319 - (17%)
Similarity:104/319 - (32%) Gaps:103/319 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ALTAVAWAN------------HHESLSLSPAEHSVVRYTNESLIVQCRSP-----DPKVELHWKS 59
            :|||..|.:            |:..::..|.|  .|||......:...|.     .|.....|. 
Mouse   116 SLTAFPWVSLLDMPHLRTLDLHNNRIASVPNE--AVRYLRNLTCLDLSSNRLTTLPPDFLDSWS- 177

  Fly    60 PKGEIIREHKGRIHIEQTSTEQLKIVFAHIALADKGN-WSCE-----------AADGSL------ 106
                         |:..|.:.........|.|..:.| |.|:           ..|.::      
Mouse   178 -------------HLAVTPSRSPDFPPRRIILGLQDNPWFCDCHISKVIELSKVTDHAVVLLDPL 229

  Fly   107 ----HSKSFDLIVYQKITFTE--------NATVMTVKEGEKATILCEVKGEPQPNVTW-HFNGQP 158
                ..:.|..|::|::...:        :||.:|...|....:.|:.||.|.|.:|| ..:|..
Mouse   230 MVCSEPERFQGILFQRVELEKCLKPSVMMSATKITSALGSNVLLRCDAKGHPTPQLTWTRSDGST 294

  Fly   159 ISAGAADDS-----KFRILADGLLINKVTQNDTGEYACRAYQV-----------------NSIAS 201
            ::.....:|     ::.|::    :..::..|.|:|.|:|..:                 .:::.
Mouse   295 VNYTVIQESPGEGIRWSIIS----LTSISHKDAGDYRCKAKNLAGISEAVVTVTVVGGVTTTLSP 355

  Fly   202 DMQERTVLMKIEHKP------------IWSKTPFVSLKYAYINGTATLMCEALAEPPAN 248
            |..||:.....|..|            .| .:|.::...:|...:|.|.....:.||::
Mouse   356 DSSERSPGEPPEQHPQPGLGGSTPPSKSW-LSPGLTSAPSYPTPSAALYTSTWSPPPSS 413

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 15/108 (14%)
I-set 128..202 CDD:254352 17/96 (18%)
Ig 133..>193 CDD:299845 15/65 (23%)
IG_like 228..307 CDD:214653 5/21 (24%)
Ig 235..305 CDD:143165 4/14 (29%)
FN3 312..415 CDD:238020
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79