Protein Alignment fipi and rig-3

DIOPT Version :10

• Sequence 1: NP_787975.1
• Gene: fipi / 33676
• FlyBaseID: FBgn0031627
• Length: 450
• Species: Drosophila melanogaster
• Sequence 2: NP_509155.1
• Gene: rig-3 / 180958
• WormBaseID: WBGene00004370
• Length: 487
• Species: Caenorhabditis elegans
• Alignment Length: 433
• Identity: 100/433 - (23%)
• Similarity: 170/433 - (39%)
• Gaps: 86/433 - (19%)

  Fly    40 ESLIVQC--RSPDP--KVELHWKSPKG------------EIIREHKGRIHIEQTSTEQLKIVFAH 88
            :.|:|.|  .|.:.  |.:|.||...|            .:|...||..| .:||     :.|:.
 Worm    55 KKLMVSCVFESDEQIHKSDLLWKQANGNNIDGESNPSLFSVILNEKGSKH-RKTS-----LHFSS 113

  Fly    89 IALADKGNWSC--EAADGSLHSKSFDLIVYQKITFTENATVMTVKEGEKATILCEVKG----EPQ 147
            :...|.|.::|  ..|.|....|:..|:|...|.:.:..||.....||..||.|.|||    ||.
 Worm   114 VHTRDTGLYTCTGRTAGGENFEKTIKLVVLPAIEWNDKDTVKGALLGEPITIDCGVKGPSGKEPM 178

  Fly   148 PNVTWHFNGQPISAGAADDSKFRILADGLLINKVTQNDTGEYACRAYQVNSIASDMQERT----- 207
            ..:| :.||:|:     |:..:.|..:...|:.:.:    |:|  ...|:.|..:|.:.|
 Worm   179 IQMT-NGNGEPL-----DEEIWTIAGNEATIDSLKK----EHA--ELTVSCITIEMHQETSKEEF 231

  Fly   208 --VLMKIEHKPIWSKTPF---VSLKYAYING---TATLMCEAL-AEPPA-NFTWYRKHNKLHSNN 262
              |..|..:..:::...|   .|::|..|:.   .|.:.|... :.||. ::|:|....::..::
 Worm   232 PVVDRKDVNIEVYTLPEFETEESVQYTVIDNHVRDAIIYCNVTHSFPPVRHYTFYHGDEEIKMSD 296

  Fly   263 R--LYTIQSDSYWSSLTIHVLNTSAFDNYRCRARNDLGTIERTTRLEQGEKPPSPANFQLRGFNS 325
            :  ::.....|..:.|.||.:|.:....|:|.|.|.......|..|.:...|..|....:.....
 Worm   297 KFNIFVNVGVSQGAHLKIHNVNENDLGTYKCEANNIKAKSYHTIHLREANAPAEPKVTLIEDKRH 361

  Fly   326 NTFDVVLSAPRGPPDSPMGVNGFRIEYMTEMEFK------TDAGKWTNARRKDYAFEEGATFLLT 384
            :....|.|..| .||.|          ||.:|.:      .:|...::....|..::..:.|:..
 Worm   362 SIIWKVESIDR-DPDLP----------MTAVEIRHLRAGTAEASGVSDEDISDAYWKSHSIFMQR 415

  Fly   385 NLEPDTVYLV-----------RAASRNLAGFSDFTKVEKYKTL 416
            |::.|.:|.:           |....|.|||.| :.|.:.|||
 Worm   416 NIKDDGIYEINGLRHGHEYVWRFRQINEAGFGD-SVVLRAKTL 457

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fipi	NP_787975.1	IG_like	33..115	CDD:214653	23/92 (25%)
		IgI_Twitchin_like	120..208	CDD:409541	25/98 (26%)
		Ig strand A	120..123	CDD:409541	0/2 (0%)
		Ig strand A'	127..131	CDD:409541	1/3 (33%)
		Ig strand B	134..141	CDD:409541	3/6 (50%)
		Ig strand C	149..154	CDD:409541	1/4 (25%)
		Ig strand C'	156..159	CDD:409541	1/2 (50%)
		Ig strand D	165..170	CDD:409541	1/4 (25%)
		Ig strand E	173..178	CDD:409541	0/4 (0%)
		Ig strand F	187..195	CDD:409541	2/7 (29%)
		Ig strand G	198..208	CDD:409541	3/16 (19%)
		IG_like	228..307	CDD:214653	18/85 (21%)
		Ig strand B	235..239	CDD:409353	1/3 (33%)
		Ig strand C	248..252	CDD:409353	1/3 (33%)
		Ig strand E	274..278	CDD:409353	1/3 (33%)
		Ig strand F	288..293	CDD:409353	2/4 (50%)
		FN3	312..415	CDD:238020	24/119 (20%)
rig-3	NP_509155.1	IG_like	48..142	CDD:214653	23/92 (25%)
		Ig	267..331	CDD:409353	14/63 (22%)
		Ig strand B	267..271	CDD:409353	1/3 (33%)
		Ig strand C	282..286	CDD:409353	1/3 (33%)
		Ig strand E	307..314	CDD:409353	2/6 (33%)
		Ig strand F	324..329	CDD:409353	2/4 (50%)