DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and igcm-2

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:483 Identity:87/483 - (18%)
Similarity:164/483 - (33%) Gaps:137/483 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LSPAEHSVV-RYTNESLIVQCRSPD-PKVELHWK--------SPKGEIIREHKG--------RIH 73
            :||:::::: :.....||.:|::.. |..|:.|.        ||...:....:|        .::
 Worm   127 ISPSKNAIIHKKVGADLIFECKAEGAPSPEITWSRNEQIISTSPVLTLSNLEEGDKGLYTCLAVN 191

  Fly    74 IEQTSTEQLKI----------------------VFAH---------------------------- 88
            ||..||..:.:                      ||.|                            
 Worm   192 IEGNSTSSIDVRFTKATILDLIPLNKTVIEGSNVFWHCHANAQATAISYSWLFEKKPIKTTSLGL 256

  Fly    89 -------------IALADKGNWSCEA---ADGSLHSKSFDLIVYQKITFTENATVMTVKEGEKAT 137
                         :..:|.|.::|||   |..:..|.::..:.|.....:.:..|.||..|...|
 Worm   257 RSNIRSGDLSLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFYPPEPLSSHQPVQTVASGRNTT 321

  Fly   138 ILCEVKGEPQP-NVTWHFNGQPISAGAADDSKFRILADGLLINKVTQNDTGEYACRAYQVNSIAS 201
            :.|:|...|.| :.||..||..:...|:..         ::|:.....|.|.|.|:|..:....|
 Worm   322 VSCDVIANPTPTSYTWSKNGHYLPTQASSH---------IIISYAKPGDGGIYGCQADNIAGKGS 377

  Fly   202 DMQERTVLMKIEHKPIWSKTPFVSLKYAYINGTATLMCEALAEPPANFTWYRKHNKLHSNNRLYT 266
            .::...:   :...|:::..|...:| ..:....::.|:...:|.....|.|...:::.      
 Worm   378 IVETHLI---VAEPPVFTVAPPSEIK-VRLGDQVSIPCQGFGDPMPIVYWIRDKKRINQ------ 432

  Fly   267 IQSDSYWSSLTIHVLNTSAFDNYRCRARNDLGTIE-RTTRLEQGEKPPSPANFQLRGFNSNTFDV 330
                   |:||...:.......|.|...|.:.||. |...|.:..||...::.:....||::..:
 Worm   433 -------STLTFKKVEHLDHGAYECVVANSVETISTRVMLLVEITKPQMASSIKFTCLNSSSMRI 490

  Fly   331 VLSAPRGPPDSPMGVNG-----FRIEYMTEMEFKTDAGKWTNARRKDYAFEEGATFLLTNLEPDT 390
            ..:.         |.||     |.:....::..     :||:.:.   :..|   .:|.:|||..
 Worm   491 SWTP---------GYNGGFDQTFAVHAQNDVTL-----QWTSIKT---SLNE---TILDHLEPFV 535

  Fly   391 VYLVRAASRNLAGFSDFTKVEKYKTLSL 418
            .|.|...|.|..|.::.|...:....||
 Worm   536 SYRVSIESVNAKGSTNSTTYNRRSCTSL 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 23/165 (14%)
I-set 128..202 CDD:254352 19/74 (26%)
Ig 133..>193 CDD:299845 16/60 (27%)
IG_like 228..307 CDD:214653 13/79 (16%)
Ig 235..305 CDD:143165 13/70 (19%)
FN3 312..415 CDD:238020 20/107 (19%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653
Ig 124..200 CDD:386229 15/72 (21%)
IG_like 214..298 CDD:214653 10/83 (12%)
Ig_3 309..371 CDD:372822 20/70 (29%)
Ig 389..467 CDD:386229 16/91 (18%)
FN3 476..548 CDD:238020 17/91 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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