DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and ncam2

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_571905.1 Gene:ncam2 / 114441 ZFINID:ZDB-GENE-010822-1 Length:795 Species:Danio rerio


Alignment Length:594 Identity:122/594 - (20%)
Similarity:201/594 - (33%) Gaps:221/594 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SLSLSPAEHSVVRYTNESLIVQCRSPDPKVELHWKSPKGE-IIREHKGRIHIEQTSTEQLKIVFA 87
            |:||...|.||    .||....|......|:|.|.:|:|| ::...:..:|.|...:   ::...
Zfish    23 SISLKKVELSV----GESKFFTCTVIGEPVKLEWFNPQGERMVASPRVALHNEGIRS---RLTLY 80

  Fly    88 HIALADKGNWSCEAAD--GSLHSKSFDLIVYQKITFTENATVMTVKEGEKATILCEVKGEPQPNV 150
            :..:.|.|.:.|:|.|  |.....:..|.:|||:||.:..:....::||.|.::|:|...|.|.|
Zfish    81 NAKIEDAGIYRCQATDAQGETQEATVVLEIYQKLTFRDVRSPQEFRQGEVAEVVCDVTSSPVPVV 145

  Fly   151 TWHFNGQPISAGAADDSKFRILA-DGLLINKVTQNDTGEYACRAYQVNSIASDMQERTVLMKIEH 214
            :|.:|...|:   .|..||.:|. :.|.:.|||:.|.|.|.|.| :|.: ..::..|.:::.:..
Zfish   146 SWFYNNIEIT---EDTEKFELLQNNNLQVQKVTKADEGVYRCEA-RVEA-RGEIDFRNIILVVNV 205

  Fly   215 KPIWSKTPFVSLKYAYINGTA------TLMCEALAEPPANFTWYRKHNKLHSNNRLYTIQSDSYW 273
            .|:      ||:.....|.||      |..|.|...|..:.||:||..:|..:.| |.:::..  
Zfish   206 PPV------VSVPQQSFNATADYGESVTFTCRAYGSPEPDVTWHRKGVQLQESER-YVMRARG-- 261

  Fly   274 SSLTIHVLNTSAFDNYRCRARNDLGTIE-----------RTTRL--------------------- 306
            ::||:..:......:|.|||.|..|.:|           ..|:|                     
Zfish   262 TTLTVRNIQQDDGGSYTCRASNKAGEVEHELFLKVFVQPHITKLRNVTAVEGSAAMISCKAEGEP 326

  Fly   307 ---------------EQGEKPPSPANFQLRG---------------------------------- 322
                           ..|:|.|. ...::||                                  
Zfish   327 LPEISWRRASDGHSFSDGDKSPD-GRVEVRGRYGESMLTIVVVKLSDWGRFDCEALSRIGGHQKS 390

  Fly   323 --------------------FNSNTFDVVLSAPRGPPDSPM-----------GVNGFRIEY---- 352
                                :..|..::.......||.:.:           |....|: |    
Zfish   391 MFLDIEYAPKFQANHTIFFSWEGNPVNISCDVMSNPPATMLWRREKLTIPSEGAGNMRV-YTAPG 454

  Fly   353 -----MTEMEFKTDAGKWTNARRKDYA--FEE-------------------------GATF---- 381
                 :|.|..: |.|::....|.:..  |:|                         ..||    
Zfish   455 RSLLEVTPMSDR-DFGRYNCTARNNIGMRFQEFILAQADVPSNPYSVRLSSVAQRVATVTFTKPD 518

  Fly   382 ----------------------------------LLTNLEPDTVYLVRAASRNLAGFSDFTKVEK 412
                                              |||||||:|.|.||.::.|..|..:|:..|.
Zfish   519 SHGGVPISHYLVKYKDISSQDWKDVKSLGTQTIVLLTNLEPNTTYEVRVSAVNGKGQGEFSHTES 583

  Fly   413 YKTLSL-EP 420
            ::||.: ||
Zfish   584 FQTLPIREP 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 20/84 (24%)
I-set 128..202 CDD:254352 25/74 (34%)
Ig 133..>193 CDD:299845 23/60 (38%)
IG_like 228..307 CDD:214653 25/131 (19%)
Ig 235..305 CDD:143165 21/86 (24%)
FN3 312..415 CDD:238020 33/241 (14%)
ncam2NP_571905.1 Ig1_NCAM-2 20..111 CDD:143274 24/94 (26%)
I-set 21..110 CDD:254352 24/93 (26%)
IGc2 127..187 CDD:197706 24/63 (38%)
Ig 213..299 CDD:299845 23/88 (26%)
I-set 213..296 CDD:254352 23/85 (27%)
Ig 298..395 CDD:299845 7/97 (7%)
I-set 300..393 CDD:254352 7/93 (8%)
IG_like 411..488 CDD:214653 13/78 (17%)
IGc2 412..480 CDD:197706 11/69 (16%)
FN3 494..586 CDD:238020 17/91 (19%)
fn3 <616..675 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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