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Protein Alignment fipi and Kirrel2

DIOPT Version :9

Sequence 1:	NP_787975.1	Gene:	fipi / 33676	FlyBaseID:	FBgn0031627	Length:	450	Species:	Drosophila melanogaster
Sequence 2:	XP_038957463.1	Gene:	Kirrel2 / 100359836	RGDID:	1308456	Length:	711	Species:	Rattus norvegicus

Alignment Length:	584	Identity:	113/584 - (19%)
Similarity:	175/584 - (29%)	Gaps:	225/584 - (38%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MRLIGFILNLAALTAVAWANHHESLSLSPAEHSVVRYTNESLIVQCRSP------DPKVELHWKS 59
            :||.|...:...|...|......:|.|:|:...    ...:||.:.||.      |..|.|..:.
  Rat   173 IRLDGTSFHQITLRDKATGTVENTLFLTPSSQD----DGATLICRARSQALPTGRDTAVTLSLQY 233

  Fly    60 PKGEIIREHKGRIHIEQTSTEQLKIVFAHIALAD---------KGN------------------- 96
            |....:...      .||:.|..|:.|...|.|.         ||.
  Rat   234 PPMVTLSAE------PQTAQEGEKVTFLCQATAQPPVTGYRWAKGGSPVLGARGPRLEVVADATF 292

  Fly    97 ----WSCEAAD--GSLHSKSFDLIVYQKITFTENATVMTVKEGEKATILCEVKGEPQPNVTWHFN 155
                .|||.::  ||.:..:...::|..|...:...| :|..|:.|:..|..:|.|.|.::|...
  Rat   293 LTEPVSCEVSNAVGSANRSTALEVLYGPILQAKPKPV-SVDVGKDASFSCVWRGNPLPRISWTRL 356

  Fly   156 G--QPISAGAADDSKFRILADGLLINKVTQNDTGEYACRA--YQVNSIASDMQERTVLMKIEHKP 216
            |  |.:|:|..           |.:..|...|.|:|.|||  .:........|.|..:
  Rat   357 GGSQVLSSGPT-----------LRLPSVALEDAGDYVCRAEPRRTGVGGGTAQARLTV------- 403

  Fly   217 IWSKTPFVSLKY---AYINGTATLMCEALAEP-PANFTWYRKHNKLHSNNRLYTIQSDSYWSS-- 275
              :..|.|:..:   |::.|.|.|.|...|.| |.:..|......|.:.: |.....:::.:.
  Rat   404 --NAPPVVTALHPAPAFLRGPARLQCVVFASPAPDSVVWSWDEGFLEAGS-LGRFLVEAFPAPEV 465

  Fly   276 ---------LTIHVLNTSAFD---NYRCRARN--------------------------------- 295
                     ..:|:..|...|   .:.|.|||
  Rat   466 EGGQGPGLISVLHISGTQESDFTTGFNCSARNRLGEGRVQIHLGRRDLLPTVRLVAGAASAATSL 530

  Fly   296 ----------------------------------------------DLGTIERTTR----LEQGE 310
                                                          |.|.|..|..    ||:.|
  Rat   531 FMVITGVVLCCWRHGSLSKQKNLVRIPGSSEGSSAHGPEEETGSSEDRGPIVHTDHNDLVLEENE 595

  Fly   311 ----KPPSPANFQLRGFNSNTFDVVLS---APRG----PPDSPMGVNGFRIEYMTEMEFKTDAGK 364
                |.|:...:::||.:     |.||   ||.|    ||.||||:.|....|    :||..
  Rat   596 ALETKDPTNGYYKVRGVS-----VSLSLGEAPGGGLFLPPPSPMGLPGTPTYY----DFKPH--- 648

  Fly   365 WTNARRKDYAFEEGATFLLTNLEPDTVYLVRA---ASRNLAGFSDFTKVEKYKTLSLEPRVSSG 425
                              |..:.|..:|..||   .:.:...|:::.|...:.    .|.:|||
  Rat   649 ------------------LDLVPPCRLYRARAGYLTTPHPRAFTNYMKPTSFG----PPDLSSG 690

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.