DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and chl1b

DIOPT Version :9

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_017212175.2 Gene:chl1b / 100318566 ZFINID:ZDB-GENE-091105-1 Length:1294 Species:Danio rerio


Alignment Length:374 Identity:86/374 - (22%)
Similarity:139/374 - (37%) Gaps:91/374 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ESLIVQCRS---PDPKVELHW------KSPKGEIIREHKGRIHIEQTSTEQLKIVFAHIALADKG 95
            |.|.::|.:   |.||||  |      |.|:..::..|...:.:|..:.|            |:|
Zfish   277 EDLQLECIAEGFPTPKVE--WVKIGFNKLPERVVVESHGKLLTVEMVNEE------------DEG 327

  Fly    96 NWSCEAADGSLHSK---SFDLIVYQKITFTENATVMTVKEGEKATILCEVKGEPQPNVTWHFNGQ 157
            .:.|.|.:.  |.:   .|.:.|.:...|........|..|....|.|.|||.|||.|.|..||:
Zfish   328 KYMCRAKNP--HGEVVHHFHVTVEEPPEFEIEPQSQLVTIGADVLIKCVVKGNPQPTVGWRVNGR 390

  Fly   158 PISAGAADDSKFRILADGLL-INKVTQNDTGEYACRAYQVNSIASDMQERTV-LMKIEHKPIWSK 220
            |::  ....|..:||.||.: |:.....::..|.|.|  .|...:.:....: :|.|:       
Zfish   391 PLN--EVPTSNRKILKDGTISIHNANPENSAVYQCEA--TNKHGTILANANIMIMNIQ------- 444

  Fly   221 TPFV----SLKYAYINGTATLM-CEALAEPPANFTWYRKHNKLHSNNRLYTIQSDSYWSSLTIHV 280
             |.:    :|:|..:.|.:.:| |:..:.|.::.||.:..:........:|:..:   .||.||.
Zfish   445 -PLILTENNLQYMAVEGKSVVMHCKVFSSPASSITWSKADSANAVEGERFTVHQN---GSLEIHN 505

  Fly   281 LNTSAFDNYRCRARNDLGTIERTTRLEQGEKPPSPANFQLRGFNSNTFDVVLSAPRGPPDSPMGV 345
            :.......|.|.|:|..|.:.....||  .|.|:              .:|     .||.....:
Zfish   506 VMKEDMGEYSCFAQNTEGKVAIAATLE--VKDPT--------------RIV-----DPPRDLRVL 549

  Fly   346 NGFRIEYMTEMEFKTDAGK-----WTNARRKD-----------YAFEEG 378
            .|..|::..:.||....|.     |    .||           |..|:|
Zfish   550 AGTTIQFSCQPEFDPSFGDDFEVLW----EKDGIALNGSEDGRYILEDG 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 20/86 (23%)
I-set 128..202 CDD:254352 25/74 (34%)
Ig 133..>193 CDD:299845 22/60 (37%)
IG_like 228..307 CDD:214653 17/79 (22%)
Ig 235..305 CDD:143165 15/70 (21%)
FN3 312..415 CDD:238020 15/83 (18%)
chl1bXP_017212175.2 Ig 61..135 CDD:325142
Ig 138..231 CDD:325142
Ig 279..348 CDD:325142 19/84 (23%)
Ig 366..438 CDD:325142 24/75 (32%)
IG 454..533 CDD:214652 19/83 (23%)
I-set 538..628 CDD:333254 14/66 (21%)
FN3 632..722 CDD:238020
FN3 734..815 CDD:238020
FN3 832..931 CDD:238020
fn3 942..1022 CDD:306538
FN3 1070..1142 CDD:214495
Bravo_FIGEY 1196..1279 CDD:316405
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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