DRSC/TRiP Functional Genomics Resources

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Protein Alignment fipi and negr1

DIOPT Version :10

Sequence 1:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_031755650.1 Gene:negr1 / 100127726 XenbaseID:XB-GENE-987949 Length:388 Species:Xenopus tropicalis


Alignment Length:349 Identity:79/349 - (22%)
Similarity:137/349 - (39%) Gaps:61/349 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LIVQCRSPDPKVELHWKSPKGEIIRE--------------HKG--------------------RI 72
            |:..|......::..|.:....::|:              .||                    |:
 Frog    28 LLPSCLPAGQSMDFQWPAVDNLVVRQGETAMLRCFLEEGASKGAWLNRSSIIFAGGDKWSVDPRV 92

  Fly    73 HIEQTSTEQLKIVFAHIALADKGNWSCEA-ADGSLHSKSFDLIVYQKITFTENATVMTVKEGEKA 136
            .|..:|.::..:....:.::|.|.::|.. .:.|..:....|.|:......:.::.|||.||...
 Frog    93 SIATSSKQEYSLRIQKVDVSDDGPYTCSVQTEHSPRTLQVHLTVHVSPKIYDISSDMTVNEGTNV 157

  Fly   137 TILCEVKGEPQPNVTWHFNGQPISAGAADDSKFRILADGLLINKVTQNDTGEYACRAYQVNSIAS 201
            :::|...|:|:|:::|    :.||..|......:.|.    |..:|::..|:|.|.|   .:..|
 Frog   158 SLICLATGKPEPSISW----RHISPSAKQFGSGQYLD----IYGITRDQAGDYECSA---ENDVS 211

  Fly   202 DMQERTVLMKIEHKP-IWSKTPF-VSLKYAYINGTATLMCEALAEPPANFTWYRKHNKLHSNNRL 264
            ....:.|.:.:...| |...||. |||     ..|..:.||..|.|...|.||:...||.:..|.
 Frog   212 FPDVKKVKVTVNFAPTILEITPTGVSL-----GRTGLIRCETAAVPAPVFEWYKGEKKLTNGQRG 271

  Fly   265 YTIQSDSYWSSLTIHVLNTSAFDNYRCRARNDLGTIERTTRLEQGEKP------PSPANFQLRGF 323
            ..||:.:..|.||:..:....|.||.|.|.|.|||...:..|.|..:|      .|.|.:.::.:
 Frog   272 IRIQNYNTRSILTVSNVTEEHFGNYTCVAVNKLGTSNASLPLNQIIEPSTTSPVTSSAKYSVKHY 336

  Fly   324 NSNTFDVVLSAPRGPPDSPMGVNG 347
            ..::.|....|  .|..:..|:.|
 Frog   337 ARSSSDKPHYA--APSTAQYGITG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fipiNP_787975.1 IG_like 33..115 CDD:214653 14/107 (13%)
IgI_Twitchin_like 120..208 CDD:409541 21/87 (24%)
Ig strand A 120..123 CDD:409541 0/2 (0%)
Ig strand A' 127..131 CDD:409541 2/3 (67%)
Ig strand B 134..141 CDD:409541 0/6 (0%)
Ig strand C 149..154 CDD:409541 1/4 (25%)
Ig strand C' 156..159 CDD:409541 0/2 (0%)
Ig strand D 165..170 CDD:409541 0/4 (0%)
Ig strand E 173..178 CDD:409541 0/4 (0%)
Ig strand F 187..195 CDD:409541 4/7 (57%)
Ig strand G 198..208 CDD:409541 1/9 (11%)
IG_like 228..307 CDD:214653 25/78 (32%)
Ig strand B 235..239 CDD:409353 0/3 (0%)
Ig strand C 248..252 CDD:409353 1/3 (33%)
Ig strand E 274..278 CDD:409353 2/3 (67%)
Ig strand F 288..293 CDD:409353 3/4 (75%)
FN3 312..415 CDD:238020 8/42 (19%)
negr1XP_031755650.1 Ig 44..136 CDD:472250 11/91 (12%)
Ig strand B 57..61 CDD:409353 0/3 (0%)
Ig strand C 70..73 CDD:409353 1/2 (50%)
Ig strand E 102..106 CDD:409353 0/3 (0%)
Ig strand F 116..121 CDD:409353 1/4 (25%)
Ig strand G 129..132 CDD:409353 0/2 (0%)
Ig 146..222 CDD:472250 22/86 (26%)
Ig strand B 157..161 CDD:409301 0/3 (0%)
Ig strand C 170..174 CDD:409301 1/7 (14%)
Ig strand E 187..191 CDD:409301 1/7 (14%)
Ig strand F 201..206 CDD:409301 2/4 (50%)
Ig strand G 215..218 CDD:409301 0/2 (0%)
Ig_3 226..302 CDD:464046 28/80 (35%)

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