DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3251 and otud4

DIOPT Version :9

Sequence 1:NP_608851.1 Gene:CG3251 / 33671 FlyBaseID:FBgn0031622 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001072598.1 Gene:otud4 / 780053 XenbaseID:XB-GENE-5900161 Length:1051 Species:Xenopus tropicalis


Alignment Length:460 Identity:105/460 - (22%)
Similarity:184/460 - (40%) Gaps:106/460 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IDRFLERRQLFRKHMLGDASSLFRVVAEQVYDTQMLHYEVRMECVRYMFTKWKTFRRFVSGDFDE 84
            :|.:|....|:||.:..|.|.|||.|||||..:|..|.::|..|:.|:......:...:.|.|::
 Frog    19 MDSYLRSEGLYRKKIAKDGSCLFRAVAEQVMHSQSEHLKIRKSCINYLRKNRGQYEALIEGSFED 83

  Fly    85 YLWHLGKTKTAGTILELGAMCHLYRRNVIIY-EPFDMGRMVTYNKDYKEILRIFMNSMGHFETVL 148
            ||..|...:.....:|:.|:..:::::.||| ||......||.|...::|:..|.|. .|::.:.
 Frog    84 YLKSLENPQEWVGQVEISALSLMFKKDFIIYQEPNVPPACVTENGFSEKIMLCFSNG-NHYDIIY 147

  Fly   149 TMQDVDMAAVCQSVSFKMLYKHLFRLPDVDLAVEWMLYPDTF------------KMGTEYEFDSR 201
            .:...:.||:|||:.:::||:   ::..|::. ::|:..||.            ..|:|.|..|:
 Frog   148 PIGFAESAAMCQSIIYELLYE---KVMGVNVG-KYMVEQDTCGPNATGEVYCSDGSGSEGEDVSK 208

  Fly   202 GRAIRLLCRNGRSFKLDRPESTICLLENSQMCPFHNRRLAMGGQFADFSCMRILLEENNIPFSYL 266
            .........||  ||..:.:.          ||...:.                 |...:|   .
 Frog   209 NIKTNFADMNG--FKPHKDDK----------CPQKKKE-----------------EPTMLP---S 241

  Fly   267 VAKSMDPCRYRNVELTSAIEARR--EAYEFGIYIGDYNFKVGAKCQVQLDTNRRDLLSACYIQSI 329
            |.:|:...:|||||....::.:|  :..:|.|..| ..:.||.||||:::...:  ....:||.:
 Frog   242 VLRSLHTTQYRNVEYEVWLKTQRDQQKLDFSIAAG-MQYSVGDKCQVRVEPGGK--FYNAHIQEV 303

  Fly   330 DKKKSVCKVFIEEQGKLVDVPSDNLHPLPPD--EFKAWDFARKRPQRLH---------------- 376
            ..:.....||:||.|:...|...:|.|:|..  ..:.|:....:.|:..                
 Frog   304 GTETGPVIVFVEELGEKHAVQLKHLKPIPQTIISTEGWNTVAGKKQKKALPSGTNAQTEKDYRGQ 368

  Fly   377 ----------------------------NSQMGRQSVQGDQQGFVPDPMPGTAPSMPPPPVADPR 413
                                        :||:..|:.|.:.:|     ...|.|.:|...|...|
 Frog   369 KGFGKPVKQQAAQPLRQQQAAGNKQYGLSSQLSDQAPQSENKG-----RSKTPPKVPGRKVERER 428

  Fly   414 PVNVT 418
            ..|||
 Frog   429 SENVT 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3251NP_608851.1 OTU 36..>115 CDD:303090 23/78 (29%)
otud4NP_001072598.1 OTU 36..>115 CDD:303090 24/78 (31%)
TUDOR 282..330 CDD:119391 14/49 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10406
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9555
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1801
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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