DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3251 and Otud3

DIOPT Version :9

Sequence 1:NP_608851.1 Gene:CG3251 / 33671 FlyBaseID:FBgn0031622 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001364018.1 Gene:Otud3 / 73162 MGIID:1920412 Length:443 Species:Mus musculus


Alignment Length:225 Identity:49/225 - (21%)
Similarity:85/225 - (37%) Gaps:61/225 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QRLASTEVRKARDP-----IDRF------LERRQLFRKHMLGDASSLFRVVAEQVYDTQMLHYEV 59
            :|..:.|.|...||     .:.|      |:...|..:.:.||.:.|||.:.:|:......|.:.
Mouse    30 RRALAKERRNRPDPGGSGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKH 94

  Fly    60 RMECVRYMFTKWKTFRRFVSGD--FDEYLWHLGKTKTAGTILELGAMCHLYRRNVIIYE---PF- 118
            |.|.|.||..:.:.|..||..|  |::::..|.|..|......:.|....::.||:|::   |. 
Mouse    95 RQETVDYMIRQREDFEPFVEDDIPFEKHVASLSKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLW 159

  Fly   119 -----DMGR------MVTYNKDYKEILRIFMNS------------------MGHFET-------- 146
                 |.|.      ...|.:.|..:.||..||                  .|..||        
Mouse   160 QIRGTDKGSTRELHIAYRYGEHYDSVRRINDNSEAPAHLLTDVSEAQLLLLSGLQETGAELCPQL 224

  Fly   147 -------VLTMQDVDMAAVCQSVSFKMLYK 169
                   .|.:::..:.::.::|.|:||::
Mouse   225 SPSGPLLSLPLREPAIQSIAKAVQFQMLHQ 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3251NP_608851.1 OTU 36..>115 CDD:303090 23/80 (29%)
Otud3NP_001364018.1 OTU 70..182 CDD:388712 28/111 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835256
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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