DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3251 and Otud1

DIOPT Version :9

Sequence 1:NP_608851.1 Gene:CG3251 / 33671 FlyBaseID:FBgn0031622 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_081991.1 Gene:Otud1 / 71198 MGIID:1918448 Length:454 Species:Mus musculus


Alignment Length:166 Identity:37/166 - (22%)
Similarity:67/166 - (40%) Gaps:28/166 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DRFLERRQLFRKHMLGDASSLFRVVAEQVYDTQMLHYEVRMECVRYMFTKWKTFRRFVSGDFDEY 85
            |::|.:|..:|.|::.|.:.|:|.|::.||..|.||.|:|.:.|.|:......|...:.||..|:
Mouse   274 DKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEF 338

  Fly    86 LWHLGKTKTAGTILELGAMCHLYRRNVII-----YEPFDMGRMVTY---NKDYKEILRIFMNSMG 142
            :....:........||.||..:...|:.:     .|...:..|:.|   ....:..:.:...|.|
Mouse   339 IIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNG 403

  Fly   143 HFETVLTMQDVDMAAVCQSVSFKMLYKHLFRLPDVD 178
            |::.|                    :.|.:..|:.|
Mouse   404 HYDAV--------------------FDHSYPNPEYD 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3251NP_608851.1 OTU 36..>115 CDD:303090 22/83 (27%)
Otud1NP_081991.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..64
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..257
Cys-loop. /evidence=ECO:0000250 287..293 1/5 (20%)
OTU 288..405 CDD:280496 27/116 (23%)
His-loop. /evidence=ECO:0000250 342..352 0/9 (0%)
Variable-loop. /evidence=ECO:0000250 399..404 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835258
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2605
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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