DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3251 and Otud1

DIOPT Version :10

Sequence 1:NP_608851.1 Gene:CG3251 / 33671 FlyBaseID:FBgn0031622 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_081991.1 Gene:Otud1 / 71198 MGIID:1918448 Length:454 Species:Mus musculus


Alignment Length:166 Identity:37/166 - (22%)
Similarity:67/166 - (40%) Gaps:28/166 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DRFLERRQLFRKHMLGDASSLFRVVAEQVYDTQMLHYEVRMECVRYMFTKWKTFRRFVSGDFDEY 85
            |::|.:|..:|.|::.|.:.|:|.|::.||..|.||.|:|.:.|.|:......|...:.||..|:
Mouse   274 DKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEF 338

  Fly    86 LWHLGKTKTAGTILELGAMCHLYRRNVII-----YEPFDMGRMVTY---NKDYKEILRIFMNSMG 142
            :....:........||.||..:...|:.:     .|...:..|:.|   ....:..:.:...|.|
Mouse   339 IIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNG 403

  Fly   143 HFETVLTMQDVDMAAVCQSVSFKMLYKHLFRLPDVD 178
            |::.|                    :.|.:..|:.|
Mouse   404 HYDAV--------------------FDHSYPNPEYD 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3251NP_608851.1 OTU_ALG13-like 20..149 CDD:438590 34/135 (25%)
Tudor_TDRD13-like 302..357 CDD:410451
Otud1NP_081991.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..64
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..257
OTU_OTUD1 262..410 CDD:438584 34/155 (22%)
Cys-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 287..293 1/5 (20%)
His-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 342..352 0/9 (0%)
Variable-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 399..404 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.