DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3251 and Duba

DIOPT Version :9

Sequence 1:NP_608851.1 Gene:CG3251 / 33671 FlyBaseID:FBgn0031622 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_648482.3 Gene:Duba / 39302 FlyBaseID:FBgn0036180 Length:659 Species:Drosophila melanogaster


Alignment Length:470 Identity:85/470 - (18%)
Similarity:157/470 - (33%) Gaps:106/470 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QRLASTEVRKARD-PIDRFLERRQLFRKHMLGDASSLFRVVAEQVYDTQMLHYEVRMECVRYMFT 69
            :||...|..:.|| ...:.:|:|....|.:..|.:.|||.::.|:|..:.:|..:|...:.|:..
  Fly   192 ERLIPVEEWQRRDLEFAKCMEQRGYELKPVEEDGACLFRSISLQIYGDEEMHDVIRQHTMDYIHE 256

  Fly    70 KWKTFRRFVSGDFDEYLWHLGKTKTAGTILELGAMCHLYRRNVIIY----EPFDMGRMVTYNKDY 130
            ..:.|.:||:.|.:.|:.........|..:|:.|:..:|.|.|.:|    .|.::     :|.:.
  Fly   257 NREYFGQFVTEDINSYIQRKRARDAHGNHIEIQAISEIYSRTVEVYCYQSNPINI-----FNSEQ 316

  Fly   131 KEI----LRIFMNSMGHFETVLTMQDVDMAAVCQSVSFK--MLYKHLFRLPDVDLAVEWMLYPDT 189
            .:.    ||:......|:..:|...:..:........:|  :..|...||.: .|.:|..::.|.
  Fly   317 SQAGYPPLRLSYQRGSHYNAILDPYNATVGVGLGLAGYKPEIQTKEAVRLSE-QLEIEQTMFEDK 380

  Fly   190 FKMGTEYEFDSRGRAIRLL-------CRNGRSFKLDRPESTICLLENSQMCPFHNRRLAMGGQFA 247
            .|. |::|..:.....::.       ||                 ||:|..  .|...|.|...:
  Fly   381 LKT-TDWEATNEAIEEQIARESYLQWCR-----------------ENTQRS--RNSNTAAGSATS 425

  Fly   248 D-FSCMRILLEENNIPFSYLVAKSMDPCRYRNVELTS---------------------AIEARRE 290
            . .:....|.:.:..|..|.............|.|||                     :.:..:|
  Fly   426 STVTSAEALTDSDASPSKYSACGGTGSSGNPPVALTSGSGGDGAGPAFSLSPKTLNQFSHKLPQE 490

  Fly   291 AYEFGIYIGDYNFKVGAKCQVQLDTNRRDLLSACYIQSIDKKKSVCKVFIEEQGKLVDVPSDNLH 355
            ..|.|.|                |::..|:.|...:.......|......:..||          
  Fly   491 VNELGGY----------------DSDATDMSSTSSVGHSGGSSSPSTAASQRSGK---------- 529

  Fly   356 PLPPDEFKAWDFARKRPQRLHNSQMGRQSVQGDQQGFVPDPMPGTAPSM--PPPPVADPRP---- 414
             ....:.:|....:||......:.:..:|.:..:......|...:|||:  ...|.|:.||    
  Fly   530 -GSKSQRRATALRKKRRHETRETTLASKSAEALEAPLRKSPKRDSAPSVARADTPEAEQRPSTSK 593

  Fly   415 -------VNVTAQQP 422
                   .||.::.|
  Fly   594 QSSHSPQKNVDSKSP 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3251NP_608851.1 OTU 36..>115 CDD:303090 20/78 (26%)
DubaNP_648482.3 OTU 224..334 CDD:303090 25/114 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445861
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2605
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4984
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12419
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.790

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