DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3251 and snca

DIOPT Version :9

Sequence 1:NP_608851.1 Gene:CG3251 / 33671 FlyBaseID:FBgn0031622 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001090876.1 Gene:snca / 100038302 XenbaseID:XB-GENE-1014191 Length:140 Species:Xenopus tropicalis


Alignment Length:20 Identity:6/20 - (30%)
Similarity:11/20 - (55%) Gaps:0/20 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 EQGKLVDVPSDNLHPLPPDE 361
            |..:.:.|..|..:.:||:|
 Frog   112 ENSENMPVNPDETYEMPPEE 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3251NP_608851.1 OTU 36..>115 CDD:303090
sncaNP_001090876.1 Synuclein 1..131 CDD:396110 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10406
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9555
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1801
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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