back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG3355 and Tmprss6

DIOPT Version :10

Sequence 1:	NP_608848.1	Gene:	CG3355 / 33667	FlyBaseID:	FBgn0031619	Length:	314	Species:	Drosophila melanogaster
Sequence 2:	NP_082178.2	Gene:	Tmprss6 / 71753	MGIID:	1919003	Length:	811	Species:	Mus musculus

Alignment Length:	301	Identity:	118/301 - (39%)
Similarity:	175/301 - (58%)	Gaps:	32/301 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    20 QYQYQAPHQTLAQQFADVVDVVDPAEQSIKAVRPP-KSRNQC---TAKQNCFCGTPNV-NRIVGG 79
            |.|...|..|...|..|        ...:|...|. ..::.|   :.:|:|.||...: :|||||
Mouse   524 QCQEGVPCGTFTFQCED--------RSCVKKPNPECDGQSDCRDGSDEQHCDCGLQGLSSRIVGG 580

  Fly    80 QQVRSNKYPWTAQL-VKGRHYPRLFCGGSLINDRYVLTAAHCVHGNRDQI------TIRLLQIDR 137
            ......::||.|.| ::|||    .|||:||.||:|:|||||.  ..|.:      |:.|.::.:
Mouse   581 TVSSEGEWPWQASLQIRGRH----ICGGALIADRWVITAAHCF--QEDSMASPKLWTVFLGKMRQ 639

  Fly   138 SSRDPGIVR-KVVQTTVHPNYDPNRIVNDVALLKLESPVPLTGNMRPVCLPEANHNFD-GKTAVV 200
            :||.||.|. ||.:..:||.::.:....|||||:|:.||..:..:||||||..:|.|: |:...:
Mouse   640 NSRWPGEVSFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCLPARSHFFEPGQHCWI 704

  Fly   201 AGWGLIKEGGVTSNYLQEVNVPVITNAQCRQTRYKDKIAEVMLCAGLVQQGGKDACQGDSGGPLI 265
            .|||..:|||..||.||:|:|.::....|.:. |:.:::..||||| .::|.||||||||||||:
Mouse   705 TGWGAQREGGPVSNTLQKVDVQLVPQDLCSEA-YRYQVSPRMLCAG-YRKGKKDACQGDSGGPLV 767

  Fly   266 VNE--GRYKLAGVVSFGYGCAQKNAPGVYARVSKFLDWIRK 304
            ..|  ||:.|||:||:|.||.:.|..|||.||::.::||::
Mouse   768 CREPSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVINWIQQ 808

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.