DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3355 and Tmprss6

DIOPT Version :9

Sequence 1:NP_608848.1 Gene:CG3355 / 33667 FlyBaseID:FBgn0031619 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_082178.2 Gene:Tmprss6 / 71753 MGIID:1919003 Length:811 Species:Mus musculus


Alignment Length:301 Identity:118/301 - (39%)
Similarity:175/301 - (58%) Gaps:32/301 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QYQYQAPHQTLAQQFADVVDVVDPAEQSIKAVRPP-KSRNQC---TAKQNCFCGTPNV-NRIVGG 79
            |.|...|..|...|..|        ...:|...|. ..::.|   :.:|:|.||...: :|||||
Mouse   524 QCQEGVPCGTFTFQCED--------RSCVKKPNPECDGQSDCRDGSDEQHCDCGLQGLSSRIVGG 580

  Fly    80 QQVRSNKYPWTAQL-VKGRHYPRLFCGGSLINDRYVLTAAHCVHGNRDQI------TIRLLQIDR 137
            ......::||.|.| ::|||    .|||:||.||:|:|||||.  ..|.:      |:.|.::.:
Mouse   581 TVSSEGEWPWQASLQIRGRH----ICGGALIADRWVITAAHCF--QEDSMASPKLWTVFLGKMRQ 639

  Fly   138 SSRDPGIVR-KVVQTTVHPNYDPNRIVNDVALLKLESPVPLTGNMRPVCLPEANHNFD-GKTAVV 200
            :||.||.|. ||.:..:||.::.:....|||||:|:.||..:..:||||||..:|.|: |:...:
Mouse   640 NSRWPGEVSFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCLPARSHFFEPGQHCWI 704

  Fly   201 AGWGLIKEGGVTSNYLQEVNVPVITNAQCRQTRYKDKIAEVMLCAGLVQQGGKDACQGDSGGPLI 265
            .|||..:|||..||.||:|:|.::....|.:. |:.:::..||||| .::|.||||||||||||:
Mouse   705 TGWGAQREGGPVSNTLQKVDVQLVPQDLCSEA-YRYQVSPRMLCAG-YRKGKKDACQGDSGGPLV 767

  Fly   266 VNE--GRYKLAGVVSFGYGCAQKNAPGVYARVSKFLDWIRK 304
            ..|  ||:.|||:||:|.||.:.|..|||.||::.::||::
Mouse   768 CREPSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVINWIQQ 808

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG3355NP_608848.1 Tryp_SPc 75..302 CDD:214473 103/237 (43%)
Tryp_SPc 76..305 CDD:238113 104/240 (43%)
Tmprss6NP_082178.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
SEA 88..185 CDD:279699
LDLa 459..489 CDD:238060