DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3355 and SPH93

DIOPT Version :9

Sequence 1:NP_608848.1 Gene:CG3355 / 33667 FlyBaseID:FBgn0031619 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster


Alignment Length:255 Identity:89/255 - (34%)
Similarity:131/255 - (51%) Gaps:25/255 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 CGTPNVN--RIVGG---QQVRSNKYPWTAQLVKGRHYPRLFCGGSLINDRYVLTAAHCVHGNRDQ 127
            ||..|.|  ::|.|   .|.|..:|||...:.   |..:...|||||....|||.||.|.....:
  Fly   233 CGMSNANGLQMVEGITIDQARPAQYPWAVAIF---HNGQYLAGGSLIQPNVVLTVAHRVITIETE 294

  Fly   128 ITIRLLQID-RSSRDPGI--VRKVVQTTVHPNYDPNRIVNDVALLKLESPVPLTGNMRPVCLPEA 189
            :.:|....| :|.|:..:  .|:|.:..:|..:|.....|::|||.|.||..|..::|.:|||..
  Fly   295 LVVRAGDWDLKSDREIFLSEQREVERAVIHEGFDFKSGANNLALLFLNSPFKLNDHIRTICLPTP 359

  Fly   190 NHNFDGKTAVVAGWGLIK-EGGVTSNYLQEVNVPVITNAQC----RQTRY--KDKIAEVMLCAGL 247
            |.:|.|:...|||||.:: |....|..|::|.:.|:....|    |.||.  |.::.:.::||| 
  Fly   360 NKSFAGRRCTVAGWGKMRYEDQRYSTVLKKVQLLVVNRNVCEKFLRSTRLGAKFELPKNIICAG- 423

  Fly   248 VQQGGKDACQGDSGGPLIV-----NEGRYKLAGVVSFGYGCAQKNAPGVYARVSKFLDWI 302
             .:.|:|.|.||.|..|..     |.|.|:.||:|::|.||.|:..|.:|..||||.:||
  Fly   424 -GELGRDTCTGDGGSALFCSIGGENSGVYEQAGIVNWGVGCGQEGIPAIYTEVSKFTNWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3355NP_608848.1 Tryp_SPc 75..302 CDD:214473 83/244 (34%)
Tryp_SPc 76..305 CDD:238113 85/245 (35%)
SPH93NP_609840.1 GRP <136..189 CDD:254089
Tryp_SPc 250..485 CDD:238113 83/238 (35%)
Tryp_SPc 252..482 CDD:214473 80/234 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457688
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.