DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HP6 and Cdyl2

DIOPT Version :9

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_083717.1 Gene:Cdyl2 / 75796 MGIID:1923046 Length:503 Species:Mus musculus


Alignment Length:75 Identity:18/75 - (24%)
Similarity:26/75 - (34%) Gaps:22/75 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NWSGKLTFLMQWK--GCDEAGLVPAEVLNVRCPQMVISFYEERIVFTDEGDEEDLESDNGYETTP 96
            |..||..:|::||  |..|....|...| :.|                   ||.::..||...:.
Mouse    18 NKKGKWEYLIRWKGYGSTEDTWEPEHHL-LHC-------------------EEFIDEFNGLHLSK 62

  Fly    97 SPRKKRSRNA 106
            ..|.|..:.|
Mouse    63 DKRVKSGKQA 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 Chromo_shadow 25..76 CDD:279701 11/43 (26%)
Cdyl2NP_083717.1 CHROMO 7..55 CDD:214605 13/56 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..177 2/7 (29%)
crotonase-like 249..445 CDD:119339
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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