DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP6 and cbx6

DIOPT Version :9

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001016617.1 Gene:cbx6 / 549371 XenbaseID:XB-GENE-951161 Length:361 Species:Xenopus tropicalis


Alignment Length:65 Identity:14/65 - (21%)
Similarity:29/65 - (44%) Gaps:13/65 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GKLTFLMQWKG--CDEAGLVPAEVLNVRCPQMVISFYEERIVFTDEGDEEDLESDNGYETTPSPR 99
            |::.:|::|||  ...:...|.|  |:...:::::|         |..|.:.|.....:..|.|:
 Frog    24 GRIEYLVKWKGWAIKYSTWEPEE--NILDSRLIVAF---------EQKEREQEIYGPKKRGPKPK 77

  Fly   100  99
             Frog    78  77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 Chromo_shadow 25..76 CDD:279701 9/40 (23%)
cbx6NP_001016617.1 CD_Cbx6 8..65 CDD:349295 11/51 (22%)
CBX7_C 320..351 CDD:375056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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