DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP6 and Su(var)205

DIOPT Version :10

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster


Alignment Length:90 Identity:41/90 - (45%)
Similarity:56/90 - (62%) Gaps:8/90 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PSSTLTSST------ALPVKQRNGFDLGLEPLRILGACNWSGKLTFLMQWKGCDEAGLVPAEVLN 60
            ||...:..|      .:||....|||.|||..:||||.:.:|:||||:|:||.|:|.:||:.|.|
  Fly   119 PSGNKSKRTTDAEQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVAN 183

  Fly    61 VRCPQMVISFYEERIVFTDEGDEED 85
            .:.|:|||.|||||:.:  ..|.||
  Fly   184 EKIPRMVIHFYEERLSW--YSDNED 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 CSD 24..75 CDD:349275 28/50 (56%)
Su(var)205NP_476755.1 CD_HP1a_insect 24..72 CDD:349300
CSD_HP1a_insect 146..198 CDD:349305 29/51 (57%)
Blue background indicates that the domain is not in the aligned region.

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