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Protein Alignment HP6 and chp2
DIOPT Version :10
| Sequence 1: | NP_608842.1 |
Gene: | HP6 / 33661 |
FlyBaseID: | FBgn0031613 |
Length: | 106 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_596808.1 |
Gene: | chp2 / 2540047 |
PomBaseID: | SPBC16C6.10 |
Length: | 380 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 46 |
Identity: | 15/46 - (32%) |
| Similarity: | 24/46 - (52%) |
Gaps: | 7/46 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 36 SGKLTFLMQWKGCDEAGLVPAE---VLNVRCPQMVISFYEERIVFT 78
:|||...::||. |.|... :::.:||..:|.:||..|.||
pombe 339 NGKLIAKIKWKN----GYVSTHDNIIIHQKCPLKIIEYYEAHIKFT 380
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HP6 | NP_608842.1 |
CSD |
24..75 |
CDD:349275 |
12/41 (29%) |
| chp2 | NP_596808.1 |
CD_Swi6_like |
175..228 |
CDD:349287 |
|
| ChSh |
316..380 |
CDD:197638 |
13/44 (30%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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