DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP6 and heri-1

DIOPT Version :9

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_495224.2 Gene:heri-1 / 183036 WormBaseID:WBGene00016236 Length:669 Species:Caenorhabditis elegans


Alignment Length:104 Identity:24/104 - (23%)
Similarity:36/104 - (34%) Gaps:20/104 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PSSTLTSSTAL-PVKQRNGFDLGLEPLRILGACNWSGKLTFLMQWKGCDEAGLVPAEVLNVRCPQ 65
            |.|.:..|..| ..|:.|..        ::...|....|||..:.||....  |..|.|..|.|:
 Worm    74 PESNIPDSVYLYEYKKLNNM--------VMNRMNLKVSLTFTSRRKGYTPP--VILEELQERKPK 128

  Fly    66 -MVISFYEERIVFTDEGDEEDLESDNG-YETTPSPRKKR 102
             ..::.....|...|       ..:|| :...|.|:.|:
 Worm   129 PQFLNMSNMAITLND-------NLNNGKFGIVPVPKYKK 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 Chromo_shadow 25..76 CDD:279701 11/51 (22%)
heri-1NP_495224.2 CHROMO 8..92 CDD:214605 5/17 (29%)
PKc <208..345 CDD:270622
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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