DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HP6 and cec-6

DIOPT Version :9

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_500828.1 Gene:cec-6 / 177338 WormBaseID:WBGene00020463 Length:891 Species:Caenorhabditis elegans


Alignment Length:115 Identity:26/115 - (22%)
Similarity:36/115 - (31%) Gaps:51/115 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KLTFLMQWKGCD--EAGLVPAEVLNVRCPQMV--------------------------ISFYEER 74
            |..:|:.|:|.|  |....|.|.|. .|.::.                          ||...|:
 Worm    48 KYAYLVHWRGYDWKERTWEPEENLE-NCEELQKFKERNNMSLDHLTFEHHYEHSTWRRISLASEK 111

  Fly    75 IVF-----TDEGDEE-------DLESDN----------GYETTPSPRKKR 102
            .|.     ||:..||       .||..|          ..||.|:.:||:
 Worm   112 CVTNRYLKTDDEIEEKRARKKAKLEEQNRKEQAKNPHASAETEPAVKKKK 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 Chromo_shadow 25..76 CDD:279701 13/65 (20%)
cec-6NP_500828.1 Mating_C 123..>278 CDD:372279 10/39 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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