DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP6 and CBX1

DIOPT Version :10

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_006798.1 Gene:CBX1 / 10951 HGNCID:1551 Length:185 Species:Homo sapiens


Alignment Length:84 Identity:43/84 - (51%)
Similarity:57/84 - (67%) Gaps:6/84 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PVKQR------NGFDLGLEPLRILGACNWSGKLTFLMQWKGCDEAGLVPAEVLNVRCPQMVISFY 71
            |.|::      .||..||||.||:||.:.||:|.|||:||..|||.||||:..||:|||:|||||
Human   100 PKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFY 164

  Fly    72 EERIVFTDEGDEEDLESDN 90
            |||:.:.....|:|.:.|:
Human   165 EERLTWHSYPSEDDDKKDD 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 CSD 24..75 CDD:349275 34/50 (68%)
CBX1NP_006798.1 CD_HP1beta_Cbx1 20..69 CDD:349297
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 10/23 (43%)
CSD_HP1beta_Cbx1 112..169 CDD:349301 38/56 (68%)
Blue background indicates that the domain is not in the aligned region.

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