DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP6 and cbx4

DIOPT Version :9

Sequence 1:NP_608842.1 Gene:HP6 / 33661 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001096327.1 Gene:cbx4 / 100124911 XenbaseID:XB-GENE-986716 Length:507 Species:Xenopus tropicalis


Alignment Length:66 Identity:15/66 - (22%)
Similarity:30/66 - (45%) Gaps:15/66 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GKLTFLMQWKGCDEA--GLVPAEVLNVRCPQMVISFYEERIVFTDEGDEEDLESDNGY-ETTPSP 98
            |::.:|::|:|....  ...|.|  |:..|:::::|.          :.|..|...|| :..|.|
 Frog    24 GRVEYLVKWRGWSSKYNTWEPEE--NILDPRLLVAFQ----------NRERQEQIMGYRKRGPKP 76

  Fly    99 R 99
            :
 Frog    77 K 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 Chromo_shadow 25..76 CDD:279701 9/40 (23%)
cbx4NP_001096327.1 Chromo 13..60 CDD:278797 9/47 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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