DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a13

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:595 Identity:241/595 - (40%)
Similarity:358/595 - (60%) Gaps:32/595 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 PQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGG 373
            |.|.|.:..:......||..|..|       |.||::|||:..|..:||||||||||:|||:|||
 Frog    16 PPTKPLMEKEPKMEDGDMMIERGQ-------WNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGG 73

  Fly   374 VFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVII 438
            .|.:||.|.||.|.||:.|:|.::||||.:|.:.|..::||||:|.|.:|.|:..|::.||.|::
 Frog    74 AFFIPYLIFLFTCGIPVFFLETALGQYTSQGGVTAWRKICPLFEGIGYSSQVIVMLLNCYYIVVL 138

  Fly   439 GYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRKGINASAPDTSRTPSE-EFFENKVLQISGGL 502
            .::::|.|.||.:|:||..|.:.|||.:| :...||.:......:.|.|. ||:|.:||:||.|:
 Frog   139 AWALFYLFNSFTSELPWASCGHSWNTENC-LDFYKGNSTHNVTLNGTSSVIEFWERRVLRISDGI 202

  Fly   503 EYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLR 567
            :..|.:.|||..||:.||::.||..||.:||:.||.|||||||::::|:|::|.|:|.||..|::
 Frog   203 DNIGGLHWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIVLLIRGVSLPGALTGIQ 267

  Fly   568 FFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLV 632
            |:..|..|.|::..||::|.:|.|.|..|..|.:.:..||||||||..||.||:..:|..||.:.
 Frog   268 FYLYPDLSRLQDPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDCVALCFLNSGTSFVA 332

  Fly   633 GIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFA 697
            |...||.||.:|.||..::.||...|||:.|:.||:|::.||::.|||..||||::.|||:|||.
 Frog   333 GFAIFSILGFMAEEQGVHISDVAESGPGLAFIAYPRAVSMMPFSPLWACFFFFMVILLGLDSQFV 397

  Fly   698 IVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAAS-VTIM 761
            .||.:||::.|.:|. |.|.....|:::|.|.:||.|.|:..:.:||:|.|||.|:|||| :.::
 Frog   398 CVESLVTAVVDMYPT-IFRKKNRRELLILGVSMISFLVGLIMLTEGGMYVFQLFDYYAASGMCLL 461

  Fly   762 FLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHN 826
            |:|..:.:.:.|.||.......|:.|.|..|:..::.|||.:.|.:..|.::.||:.|...|| |
 Frog   462 FVAIFETLCVGWVYGADNFYDKVEHMIGYRPTGIIKYCWLFVTPAVCMATFLFSLVKYTPLTY-N 525

  Fly   827 GRYTYPDWAYGIGWMFASFSLICIP---GYAVINFLRSSGDTFWERIRNTLRPNIYECKICGEHH 888
            ..|.||.|...|||:.|..|::|||   ||.    |.:...:..||.|....|            
 Frog   526 KHYVYPWWGDAIGWLLALSSMVCIPLWVGYK----LSTIKGSLMERFRQLTFP------------ 574

  Fly   889 CEHDYPEQEQ 898
             :.|.|::.|
 Frog   575 -DPDLPQKTQ 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 230/543 (42%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:382020 233/568 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.