DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a1a

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_001038752.2 Gene:slc6a1a / 692318 ZFINID:ZDB-GENE-060519-23 Length:679 Species:Danio rerio


Alignment Length:642 Identity:250/642 - (38%)
Similarity:383/642 - (59%) Gaps:44/642 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 LASIGIGSTDGRKLVIRRVPTTANELFDMVNPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWAN 342
            :|:....||||      :|.|..||:.....|:|        :|:..:.:.:..   |.::.|..
Zfish     1 MATNNTKSTDG------QVVTELNEITTNDKPKT--------EDAKPEKNKKDI---PDRETWGG 48

  Fly   343 KMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIG 407
            |..|:|:|:||::||||||||||:|.|:|||.||:||.:.|....:||.|:|.::||||.   ||
Zfish    49 KFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQYTS---IG 110

  Fly   408 ALG--QLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVP 470
            .||  :|.|:|||.|||:.|:||.::.||.|||.:::||.:.||.|::||..|||.|||..|:. 
Zfish   111 GLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWALYYLYNSFTTDLPWKSCNNPWNTDRCYT- 174

  Fly   471 QRKGINASAPDTSRTPSE--EFFENKVLQISGGLEYPGMMRWELFACLICAWLMVYFATWKSIKS 533
                 |.|..||:...|.  ||:|..|.|::.|||.||.:|..|...|..||::|||..||.:..
Zfish   175 -----NYSIVDTTNLTSAVMEFWERNVHQMTDGLEKPGEIRVPLAITLAIAWVLVYFCIWKGVSW 234

  Fly   534 SAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITF 598
            :.||.||:||:|:.::.||.:|.|||.||.||:.|:..|.:.:||.:.||::||:|.|.|.|:..
Zfish   235 TGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFYITPDFEKLKESEVWLDAATQIFFSYGLGL 299

  Fly   599 GSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIF 663
            ||:|:..|||.:|||:.||::.|..:|..||:..|...||.:|.::......:.||...|||:.|
Zfish   300 GSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMSHVTKRPIADVAASGPGLAF 364

  Fly   664 VVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFV 728
            :.||:|:.::|.:.|||::||.|||.||::|||..||..:|::.|.|||.:::.   .||.:..|
Zfish   365 LAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRLLRKR---REIFIACV 426

  Fly   729 CVISCLFGMPNIIQGGIYYFQLMDHYAAS-VTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAP 792
            ||:|...|:.||.|||:|.|:|.|:|:|| :.::||.|.:.|:|:|.||..:...|:::|.|..|
Zfish   427 CVVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNKFYDNIQEMIGYKP 491

  Fly   793 SFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVIN 857
            ..:.:.||:...|.::..:::.|.:.....|.:|  |.:|.|..|:||:.|..|::.||||....
Zfish   492 CIWWKLCWVFFTPLVVAGVFLFSAVQMVPLTMNN--YVFPKWGQGVGWLMALSSMVLIPGYMGYM 554

  Fly   858 FLRSSGDTFWERIRNTLRPNIYECKICGEHHCEHDYPEQEQFMLAQEMATVYKPTNP 914
            ||...| |:.||||..|:|...:       ..:.:.|||:|.....:..:..:|.:|
Zfish   555 FLNLKG-TYKERIRIMLQPPAVK-------RAQENGPEQQQSQPPIQEQSPQQPQSP 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 230/543 (42%)
slc6a1aNP_001038752.2 SLC5-6-like_sbd 2..588 CDD:294310 247/624 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.