DRSC/TRiP Functional Genomics Resources

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Protein Alignment ine and slc6a4a

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:612 Identity:226/612 - (36%)
Similarity:361/612 - (58%) Gaps:27/612 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 STDGRKLVIRRVPT----------TANELFDMVNPQTPPP---LGVD---DDDSYLDMSDETAQL 333
            |.:..:||:..||.          ..:..:...:||:|..   .|.|   ...::..:..:...|
Zfish    23 SQENGRLVVDSVPEKDQKSGSGPGQVSNGYRSTSPQSPKEGAGTGTDRVNTPGTFRTLVVQQTSL 87

  Fly   334 KPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVG 398
            .|.::.|:.||.|:|:.|||:|.|||||||||:||::|||.||:||.::.....:||.:|||::|
Zfish    88 DPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELALG 152

  Fly   399 QYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWN 463
            |:...|.|.....:||:|||.|.|..:::..::.||:.|:.:::||..:||:..:||..||||||
Zfish   153 QFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRATLPWTTCNNRWN 217

  Fly   464 TPDCWVPQRKGINASAPDTSRTPSEEFFENKVLQI--SGGLEYPGMMRWELFACLICAWLMVYFA 526
            ||:|.......:|.|..:.|.:|:|||:..:|||:  |.||...|.:.|:|..||:..:.:|||:
Zfish   218 TPNCTHYLSTDLNVSWTNNSISPAEEFYVRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTVVYFS 282

  Fly   527 TWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNF 591
            .||.:|:|.||.:.|||||:::::||::|..||.||..|:.|:.:|.|.:|....||::||:|.|
Zfish   283 IWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWKKLLTTTVWLDAAAQIF 347

  Fly   592 NSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIG 656
            .|||..||.:::|||||.::||..:|.:..|:||.:||.|.|...|:.||.:|..:...|..|..
Zfish   348 FSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQQGVETVAK 412

  Fly   657 D-GPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGY 720
            | ||.::|::|.:|:|.||.|..:|::||.|::.|||:|.||.:|.|:|::.|.||..:.|...:
Zfish   413 DAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREW 477

  Fly   721 HEIVVLFVCVISCLFG-MPNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNV 784
              .|:..|||  |..| :..:..||.:..:|.:.||....::.:.|.::||::|||||.|...:|
Zfish   478 --FVLGLVCV--CYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDV 538

  Fly   785 KQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLIC 849
            :.|.|.||..:.|.||:.:.||.|..| ::|.:.: .|......|.||.|...:|:.....|.||
Zfish   539 QLMLGFAPGLFWRVCWIAICPCFLLFI-IVSFLAF-PPEVKLFDYLYPFWTTVLGYCIGVSSFIC 601

  Fly   850 IPGYAVINFLRSSGDTFWERIRNTLRP 876
            :|.|.|.:.:.:.| ||.:|:...:.|
Zfish   602 VPSYMVYHLVTTKG-TFQQRLLKGITP 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 213/542 (39%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 214/544 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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