DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and Slc6a16

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_001311464.1 Gene:Slc6a16 / 381884 MGIID:2685930 Length:742 Species:Mus musculus


Alignment Length:652 Identity:167/652 - (25%)
Similarity:270/652 - (41%) Gaps:143/652 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 VPTTANELFDMVNPQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNV 360
            |.|...|..::||                .||.|:::..|.:|.||:|::::||.:.|.:....|
Mouse   100 VTTLEQESSELVN----------------RMSRESSEGYPPRQLWASKVEYMLAIMSYLLMPSGV 148

  Fly   361 WRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVV 425
            .||.......|...|.:.|.::|....|||||:|::|||...:........|.|.|.|.|.:.|:
Mouse   149 LRFASGWVHKGSCSFFIAYILMLLGIGIPLLFLEMAVGQRAQQSSADMWKNLSPWFGGVGYSMVM 213

  Fly   426 VSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNT----PDCWVPQRKGINASAPDTSRTP 486
            |.|:.:||.:|...:.::|....|...:||..|..:.|:    |:|              ...|.
Mouse   214 VCFITNTYLNVFNSWILFYMSHIFYFVVPWDQCPLQRNSSNFDPEC--------------EQATS 264

  Fly   487 SEEFFENKVLQISGGLEYPGM------MRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFP 545
            ...|:..|.|:.|..:|..|.      |...|..|||||:|:      ..|||..||.:.....|
Mouse   265 YTYFWYRKTLKASDRIEDGGQPSFSLGMSLFLSFCLICAFLV------NGIKSIGKVLFVLLLVP 323

  Fly   546 FVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKY 610
            :.:|:..::|.:::|||..||:.....|.:.:.:..:|.:|..|....:|:.||.::|.||:...
Mouse   324 YSIIVCFLIRTLSMDGAEYGLKHLLILKVASISDLTIWCHAGIQVLFDIGLGFGPIVSLASHVPD 388

  Fly   611 NNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLAL---------EQNTNVRDV------------ 654
            .||.:.|...::...:||.|:...|..|.||..|.         .|.|.:|.|            
Mouse   389 FNNCMADAFLMALFKIITLLMTTPFLLSILGFWATTTTHHCCKKNQETLLRLVAQGILPPDAQPP 453

  Fly   655 ----------------------------------------IGDGPGMIFVVYPQAMAKMPYAQLW 679
                                                    |.|.|..:|:::.:.::.:|.:..|
Mouse   454 DLSGNPTSNYNSWLSSLPPPLRSAVLSVVPECSVQKQFLKIKDNPRFLFLIFTEVISLLPGSGFW 518

  Fly   680 AVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLF--GMPNIIQ 742
            .|:||.:||.|||.|....:...|.::||.|| :.:|     :..:|.|||...:|  |:..|..
Mouse   519 IVLFFLLLLTLGLCSNLMFMLGNVLTLQDTFP-FCRR-----QPRLLIVCVSMAMFLCGLIFIQP 577

  Fly   743 GGIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSF--------YLRS- 798
            .|||||.|:.....:|.::.:..|:.:|:||.||..|...::..:.|: |.|        |:.. 
Mouse   578 SGIYYFSLLSECWVAVPVIIIIICENLAVAWAYGADRFLADMVALLGR-PIFSGCGWLWCYISPM 641

  Fly   799 ----------CWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGY 853
                      .:||.||.:.|| |..|       |.......:|:|:..:......|.|:.||.|
Mouse   642 VVLGLLTSVFVYLVKGPLVYFA-WDSS-------TSKEVVRVFPEWSKILIAGLTVFVLMPIPAY 698

  Fly   854 AV 855
            .|
Mouse   699 FV 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 158/611 (26%)
Slc6a16NP_001311464.1 SLC5-6-like_sbd 125..694 CDD:294310 154/603 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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