DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and List

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:564 Identity:211/564 - (37%)
Similarity:324/564 - (57%) Gaps:36/564 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 SDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLL 391
            |::.|: ||.:| |.|.::|:.:||..||||||:|||||:.:::|||.|::||.|.|.:...|:.
  Fly    10 SEKPAE-KPAEQ-WGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVY 72

  Fly   392 FMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWI 456
            ::|:|:||:||||.:.|. .:.||.||..|..|:.:....||||.|:..::.::..||.:|:||.
  Fly    73 YLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWS 136

  Fly   457 DCNNRWNTPDCWVPQRKGINASAPDTSRTPSEEFFENKVL----QISGGLEYPGMMRWELFACLI 517
            .|...|.| ||    ..| ||.......:|::.:||.::|    .|..||..|   .|:|.|||.
  Fly   137 RCWESWGT-DC----HDG-NAQNSSGKMSPAQLYFEREILHEVPNIDNGLSLP---NWQLVACLA 192

  Fly   518 CAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANV 582
            .|||::.....:.||||.|..||...||:|:::||::|||||.||.:|:.:||:|:|.||.|..|
  Fly   193 IAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLV 257

  Fly   583 WINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQ 647
            |..|.:|.|.||.|.||::|::||||.:|.|:..|.|.::.::..:|::.|...|..|||||.|.
  Fly   258 WYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARET 322

  Fly   648 -NTNVRDVIGDGPGMIFVVYPQAMAKMPYA-QLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGF 710
             |.::..|:..|.|:.|:.||:|:||..|. |::||:||.||..||:.|...:...::..|:|.|
  Fly   323 GNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQF 387

  Fly   711 -----PRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIA 770
                 |.| |...|   :.||...| |.::..|    ||.:...|:|.|..|.|.:.||..:::|
  Fly   388 GLRSPPIW-KLASG---LTVLGFSV-SIVYMTP----GGQFILNLVDFYGVSFTALILAIGELVA 443

  Fly   771 IAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWA 835
            :||.||..|..:::|.|.|....:|.|.||..:.|.|:.|:.:..|::.....|..  ..||..|
  Fly   444 VAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKG--VGYPTLA 506

  Fly   836 YGIGWMFASFSLICIPGYAVINFLRSSG--DTFWERIRNTLRPN 877
            :..|...|:..||.:||:|:....:..|  .:||:|||...:|:
  Fly   507 HVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPS 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 206/551 (37%)
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 188/489 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440800
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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