DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ine and slc6a22.1

DIOPT Version :9

Sequence 1:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_005166076.1 Gene:slc6a22.1 / 368923 ZFINID:ZDB-GENE-030616-629 Length:584 Species:Danio rerio


Alignment Length:560 Identity:225/560 - (40%)
Similarity:342/560 - (61%) Gaps:9/560 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 SYLD-MSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFI 385
            :|.| .|:||......:..|::|::|:||..|..:||||||||||:|||:|||||.:||.:.||.
Zfish    14 AYSDAQSNETGLKTQIRGQWSSKVEFILAVAGQIIGLGNVWRFPYLCYKNGGGVFFIPYVVFLFA 78

  Fly   386 CSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFK 450
            |.|||..||.::||||.:|.:....::||||:|.|..|.||....|.||.:|:.::.:|.|:||.
Zfish    79 CGIPLFLMETALGQYTSQGSVTCWRKICPLFEGLGYGSQVVVLYSSAYYIIILAWAFFYLFSSFS 143

  Fly   451 TEMPWIDCNNRWNTPDCWVPQR-KGI-NASAPDTSRTPSEEFFENKVLQISGGLEYPGMMRWELF 513
            .|:||..|.|.||:.:|....| :|. |.|....:.:|.:||:|.:||.|:|.:...|.:||||.
Zfish   144 GELPWASCRNWWNSENCVEFDRMQGAKNLSFMANASSPVKEFWERRVLNITGSVNELGSVRWELA 208

  Fly   514 ACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELK 578
            .||:.||::.||..||.:||:.||.|||||||:|::::|::|.:||.||.:|:.|:..|..:.|.
Zfish   209 LCLLLAWVICYFCVWKGVKSTGKVVYFTATFPYVMLMVLLIRGLTLPGAIDGITFYLYPNPARLA 273

  Fly   579 NANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNL 643
            :..||::|.:|.|.|..:..|.:.:..||||||||..:|.|.:..:|..||.:.|...||.||.:
Zfish   274 DPQVWMDAGTQIFYSYALCIGCLTALGSYNKYNNNCYKDCVYLCLLNSGTSFVAGFAIFSVLGFM 338

  Fly   644 ALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQD 708
            ||||..::..|...|||:.|:.||:|:|.||.||||::.||.|::.|||:|:|..:|.::|:|.|
Zfish   339 ALEQGVDISVVAESGPGLAFIAYPRAVAMMPMAQLWSICFFLMIILLGLDSEFVGLESLMTAITD 403

  Fly   709 GFPR-WIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQLMDHYAAS-VTIMFLAFCQMIAI 771
            ..|. :::.|  ..::.:|.:|:...|.|:..:.:||:|.|||.|:|:.| :|::..|..|.|.|
Zfish   404 MNPNFFLQGH--RRKLFLLVICIACFLIGLLMVTEGGLYVFQLFDYYSCSGMTLLLFAIAQSICI 466

  Fly   772 AWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAY 836
            .||||..||.:|:..|.|..|...::.||..:.|.:....::.||:.: .|...|..|.||.|.|
Zfish   467 GWFYGADRLYENIADMIGYHPLTLMKYCWKYITPIVCIGTFIFSLVKF-TPLKFNNTYEYPWWGY 530

  Fly   837 GIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRP 876
            ..||.|...|.:.:|.:.:...|.:.| |..:|:|....|
Zfish   531 AAGWWFTLSSTLLVPIWMIYAILVTPG-TLKQRLRVLCTP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 219/542 (40%)
slc6a22.1XP_005166076.1 SLC6sbd-TauT-like 30..569 CDD:271387 219/542 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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